JCEG ID |
JCEG071 |
Name |
C27A12.9
WormBase
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Human Ortholog |
GGDB:PIGO
OMIM:
614730
614749
OrthoList :
PIGO
(Ensembl Compara)
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Family Name |
GPI-anchor synthesis |
Locus Tag |
C27A12.9
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RNAi phenotype |
phenotype
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Microscope observation (Image)
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COPAS (Image)
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hsp-4::GFP (Image)
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Sequence Features |
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Sequence |
CDS
ATGGGATCAATAATTCGAATACTCCTGGTTTCAATCAATATTCTTCTAGCCTTATTTATT TTTCAAAATGGATTTCTTTTGAAAAGACAGGAGATTTTATCGAAATCCAGTTGCTCCGAT GCTCATGCACAACCTGGACAAACGTGTTGGATGAAACAGCAATATCAGAGAGTGATTCTT ATACTCGTCGACGCTCTTCGCTACGATTTTCTGATTCCAATTGACGAAAATACAAAAAAA TCGAAGGAGGAATGGTACTATCGAGGACAAATGAAAAATATCGAAAAACTTGTAAAATCG GGGAATGTATCAATTGGAACTCTTCTAGCCGATCCACCAACAACTACATTGCAAAGATTA AAGGCATTAACCACTGGAACCCTTCCAACATTTATTGACGCTGGAGACAATTTCTCGCCT GATGCGGTCATAAGTGAAGATAGTTTTGTCTATCAAGCAGCACAACTTGGAAAAAATGTC ACACTTCTCGGAGATGACACGTGGCTTTCCTTGTTCCCAAATCAATTCTCAAAAACAGCA GCCTACGATTCATTCGACATTAATGATTTGAACACCGTCGATGATAAAATTGCTCCGATT CTACAAGATGAAATGCTCAATTCAAACTCATCAATCATTATTGCTCATTTTCTCGGAGTT GATCACTGTGGACATAAATTTGGACCATCTCATCCAGTCATGGCAGACACTCTGCGAAAA ATGGATCGAATAATTGGTCAAACGATCGAAACAATGAAATCTGATGATCATGGAATGACA TCTACAGGAGATCATGGCGGAGAATCTGAAAATGAAATTCGTGCAGGAATCCTTGTACAC TCAAAAAAACATCAAATTATTCTTCCTGAACGTCCAATTCATCAAATCGATATTGTTCCA ACAATATCTCTTCTAATGGGTCTTCCTATTCCATTTTCCAATTTAGGAACTGTTATCACT CAATTATTTACCAGAGATTTATGGGAAATTGCGGTTGGAATGAATTATGAGCAAGTAAAA AGATTCGCGGAAACTTACGCGGCGCAGAAAAATTTCGGCGAACTTCATTCTCATACAATT CGCGATTCAAATACAATGGAAGAACAGCTCGACACAATGTCACGAATCCAGACACTTCTT CGAGTATCGTGGACTCAATTTGATGATGCTTATATTAATGCTGGAATATTCTCACTCGTT GAAGCTATCATGTTCTTGATTACTAATGAGGTGATGTCTTTAGAATGGATAATCTATCGA ACGGGATGTGGTCTCCTTCAGGCAGCACTTCTCACTGATAAAACTGATTCCGATGGGAGT GCCAGAACTTTGTTACTGATGACTCTCGCGGTCTCGTGTCTCTCCTCTATCATATCAATG TGTCATAAAGCTTTGCAAATTCGGATATCGATAAAATCGATGCTCTCGGCAAAAGTAATA GGCCCAATTCTCGTCATAATCCATTCGATTAGTCTTTTTTCGAACAGTTATGTGGTCTAC GAAGCTCAAGTTGTTCGATACTTTTTGCAATCACTCGTTACTCTCGTGTTTCTTGAAAAA TTGCGCTCGACTGCGTTGCGCCCTCGGAAACCGTTTAAGCTAAATTTTCTTTGGAAATTT GTAAATCAAGATCAAAATCTAATAATTTTCACACTAATTATGGTTGGTCTGAGGTCGGAG CCCATTTTTCATAGATGTCGTGAAGAAGAAGTTGGATGTGATACATATTACCCTTCGAGG CAGGCTGGGAGTTTAACCAGAGACGCACAAGTTGTCCGACTTCTATTTGCTCTCGGATCT CTTGCTGTCGCCAATCTCTCGGTTTTCAAATATTACGGACTTCGAGATACCAAAAGTCAA ATTGAATCAAACTCAAAGAGGAGTTCAGAAACAATTCGAATTCTCTCAGCAACATCATGG CTTCACATTGCAATTATTGTACTTCACTCAGTATTCGCATCATTGACACATGATGTCTCC AGAGCCAATTTGTCGGCTCATTCGCTTTCTGTGATTTCTTTAATTTGCGCTGTTCTCGCT TGGAGAGAAGGAAATTCTGCGATATGTGCTCATTTTTTATTGATGCCGGTTTATATCTTA TTTGGTGACGGGCTGATTCCGGCGATAATTATATTCATAGCAGTTTCAGTATTAATTGCT GAATTTGTGTCAAGAGAATTCATTGCATCTACAATCGCTTTGCTCATCCCACTAGGATTC TATCATCTTGGACATTCACCAGTTATCTCTTCAATTCCATGGAATGCTGCGTTTGTTGGA ATTCCTGGTGGAACAGCTCTTCGTGTCCTCCCTGCACTTTTCGTACTCTTTCATCTCAAC TTTTCGGCGATCTCATCGATTTTTGTGATCTCAAGTGAAAGTGAATCTAGTCAGAAAATG TCTGCACCCAACACAGCTTGGACGTTAACAGAAACTCTTGTATTGATGACAATACGGGCA ACGCTCACTTGTTTGGTCTCTTCAATACATCGGCGTCATCTGATGGTTTGGAAAATATTC GCTCCAAAGTTCATTTTCGAATGCATTCTCACCATCGTCTTCATTTTCTCAGCCAATTTC TTTCTTATTTATCGACAGTTTTTTGGCGAGAAATTCAAGAATAGTGAAGCAAAAATAAAT AAATTACATTGA
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Protein
MGSIIRILLVSINILLALFIFQNGFLLKRQEILSKSSCSDAHAQPGQTCWMKQQYQRVIL ILVDALRYDFLIPIDENTKKSKEEWYYRGQMKNIEKLVKSGNVSIGTLLADPPTTTLQRL KALTTGTLPTFIDAGDNFSPDAVISEDSFVYQAAQLGKNVTLLGDDTWLSLFPNQFSKTA AYDSFDINDLNTVDDKIAPILQDEMLNSNSSIIIAHFLGVDHCGHKFGPSHPVMADTLRK MDRIIGQTIETMKSDDHGMTSTGDHGGESENEIRAGILVHSKKHQIILPERPIHQIDIVP TISLLMGLPIPFSNLGTVITQLFTRDLWEIAVGMNYEQVKRFAETYAAQKNFGELHSHTI RDSNTMEEQLDTMSRIQTLLRVSWTQFDDAYINAGIFSLVEAIMFLITNEVMSLEWIIYR TGCGLLQAALLTDKTDSDGSARTLLLMTLAVSCLSSIISMCHKALQIRISIKSMLSAKVI GPILVIIHSISLFSNSYVVYEAQVVRYFLQSLVTLVFLEKLRSTALRPRKPFKLNFLWKF VNQDQNLIIFTLIMVGLRSEPIFHRCREEEVGCDTYYPSRQAGSLTRDAQVVRLLFALGS LAVANLSVFKYYGLRDTKSQIESNSKRSSETIRILSATSWLHIAIIVLHSVFASLTHDVS RANLSAHSLSVISLICAVLAWREGNSAICAHFLLMPVYILFGDGLIPAIIIFIAVSVLIA EFVSREFIASTIALLIPLGFYHLGHSPVISSIPWNAAFVGIPGGTALRVLPALFVLFHLN FSAISSIFVISSESESSQKMSAPNTAWTLTETLVLMTIRATLTCLVSSIHRRHLMVWKIF APKFIFECILTIVFIFSANFFLIYRQFFGEKFKNSEAKINKLH
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References |
Meissner B, Warner A, Wong K, Dube N, Lorch A, McKay SJ, Khattra J, Rogalski T, Somasiri A, Chaudhry I, Fox RM, Miller DM, Baillie DL, Holt RA, Jones SJ, Marra MA, Moerman DG
PLoS Genet.
(2009)
5
(6)
:e1000537
[PMID : 19557190]
An integrated strategy to study muscle development and myofilament structure in Caenorhabditis elegans.
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Functional Descriptions |
C27A12.9
none available
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Deletion Mutants |
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In Situ |
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Expression |
Expression
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WBGene00016159
Phenotype
Homology_paralog
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Phenotype |
Definition |
RNAi / Allele |
body wall muscle myosin organization defective
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"The characteristic organization of myosin filaments into discrete A-bands within the muscle cells is disrupted. In C. elegans, myosin filaments no longer appear as continuous longitudinally oriented fibers across the muscle quadrants." [WB:WBPaper00001894, WB:WBPerson2021]
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embryonic lethal
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"Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die." [WB:cab, WB:WBPaper00000179, WB:WBPaper00004403, WB:WBPaper00004540, WB:WBPaper00004651, WB:WBPaper00004769, WB:WBPaper00005654, WB:WBPaper00024497, WB:WBPaper00024925, WB:WBPaper00025054]
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larval arrest
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"The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage." [WB:WBPaper00002958, WB:WBPerson2021]
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larval lethal
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"The animal dies at any time between hatching and onset to adulthood." [GO:0002119, WB:WBPerson712]
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lethal
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"Animals die prematurely at any stage of the life cycle." [WB:WBPaper00001109, WB:WBPerson2021]
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maternal sterile
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" Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility)." [WB:cab, WB:cgc5599, WB:cgc7141, WB:WBPerson557]
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organism morphology variant
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"Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals." [WB:cab, WB:WBPaper00004402, WB:WBPaper00004403, WB:WBPaper00004651, WB:WBPaper00005654, WB:WBPaper00006395]
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postembryonic development variant
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"Any variation in the progression of an animal over time, from hatching to adulthood, compared to control." [WB:WBPerson2021]
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slow growth
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"Any variation that causes a reduction in growth rate compared to control." [WB:cab, WB:WBPaper00004402, WB:WBPaper00004403, WB:WBPaper00004651, WB:WBPaper00004769, WB:WBPaper00005654, WB:WBPaper00006395, WB:WBPaper00024497, WB:WBPerson557]
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sterile progeny
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"Any variation that compromises the reproductive ability of the progeny of an animal." [WB:WBPerson2021, WB:WBPerson557]
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Variant
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"Animals exhibit variations compared to a given control." [WB:WBPerson557]
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