JCGG-STR019649:JCGGDB ID

JCGGDB Glycan Structure Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)

Glycan Information

Glyco Tree get Image

Composition

Hex 4 HexNAc 2
Mass Value Search

GlcNAc 2 Man 4
Structural Isomer Search

Descriptors Computed from Structure

InChIKey	IASTXRIYHKJGKE-PPSSZDSMSA-N
InChI	InChI=1S/C40H68N2O31/c1-9(47)41-17-23(53)32(13(5-45)65-35(17)62)71-36-18(42-10(2)48)24(54)33(14(6-46)68-36)72-40-31(61)34(73-39-30(60)26(56)20(50)12(4-44)67-39)22(52)16(70-40)8-64-38-29(59)27(57)21(51)15(69-38)7-63-37-28(58)25(55)19(49)11(3-43)66-37/h11-40,43-46,49-62H,3-8H2,1-2H3,(H,41,47)(H,42,48)/t11-,12-,13-,14-,15-,16-,17-,18-,19-,20-,21-,22-,23-,24-,25+,26+,27+,28+,29+,30+,31+,32-,33-,34+,35-,36+,37+,38+,39-,40+/m1/s
SMILES	CC(=O)N[C@H]1[C@H](O)O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@@H](O[C@@H]3O[C@H](CO[C@H]4O[C@H](CO[C@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]5O)[C@@H](O)[C@H](O)[C@@H]4O)[C@@H](O)[C@H](O[C@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]4O)[C@@H]3O)[C@H](O)[C@H]2NC(C)=O)[C@@H]1O

Mass

	Monoisotopic Mass	Average Mass
Underivatised Oligosaccharides	1072.3805 (A_n=2 ) = 748.2749+ A[162.0528]_n=2	1072.9748 (A_n=2 ) = 748.69+ A[162.1424]_n=2
Permethylated Oligosaccharides	1352.6934 (A_n=2 ) = 944.494+ A[204.0997]_n=2	1353.5122 (A_n=2 ) = 945.0662+ A[204.223]_n=2
Peracetylated Oligosaccharides	1828.5706 (A_n=2 ) = 1252.4016+ A[288.0845]_n=2	1829.6455 (A_n=2 ) = 1253.1371+ A[288.2542]_n=2

Glycan Motifs

Motif ID	Structure / SubStructure Name	Note
JCGG-MOTIF1001	N-glycan core structure	Reducing Terminal

External Links

GlycomeDB (Structure)

GlycomeDB 2827 2827

KEGG (Structure)

KEGG G12176 G12176

CarbBank

CCSD : 1162

Title : Preparation and characterization of fragment glycoasparagines from ovalbumin glycopeptides: reference compounds for structural and biochemical studies of the oligo-mannose and hybrid types of carbohydrate chains of glycoproteins

Authors : Nomoto H; Endo T; Inoue Y

Info : Carbohydr Res (1982) 107: 91-101

Other Data : 2010-12-17

CCSD : 1389

Title : Compositional and structural heterogeneity of avidin glycoproteins

Authors : Bruch RC; White HB

Info : Biochemistry (1982) 21: 5334-5341

Other Data : 2010-12-17

CCSD : 7523

Title : Asparaginyl glycopeptides with a low mannose content are hydrolyzed by endo-.beta.-N-acetylglucosaminidase H

Authors : Trimble RB; Tarentino AL; Plummer TH (Jr); Maley F

Info : J Biol Chem (1978) 253: 4508-4511

Other Data : 2010-12-17

CCSD : 37749

Title : Glycobiology of the pentraxins

Authors : Tennent GA; Pepys MB

Info : Biochem Soc Trans (1994) 22: 74-79

TAXID : 6850 Other Data : hemolymph Other Data : 2010-12-17

JCGGDB ID JCGG-STR019649

Glycan Information

External Links