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構造リスト
JCGGDB Glycan Structure
Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)
JCGGDB ID
JCGG-STR015739
version 2
Glycan Information
4
4
3
2
]
B
2
4
6
2
]
A
2
4
6
[
[
GlcNAc x-dglc-HEX-1:5 JCGG-MOTIF1002
GlcNAc b-dglc-HEX-1:5 JCGG-MOTIF1002
Man b-dman-HEX-1:5 JCGG-MOTIF1002
Man a-dman-HEX-1:5 JCGG-MOTIF1002
GlcNAc b-dglc-HEX-1:5 JCGG-MOTIF4091
Gal b-dgal-HEX-1:5 JCGG-MOTIF4091
Man a-dman-HEX-1:5 JCGG-MOTIF1002
GlcNAc b-dglc-HEX-1:5 JCGG-MOTIF4091
Gal b-dgal-HEX-1:5 JCGG-MOTIF4091
Fuc a-lgal-HEX-1:5|6:d JCGG-MOTIF1002
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Composition
Hex 7 HexNAc 6 dHex 1
Mass Value Search
Fuc 1 Gal 4 GlcNAc 6 Man 3
Structural Isomer Search
Mass
Monoisotopic Mass
Average Mass
Underivatised
Oligosaccharides
1460.5288 (A
n=2
B
n=2
)
=? +
A[365.1322]
n=2
+
B[365.1322]
n=2
1461.3496 (A
n=2
B
n=2
)
=? +
A[365.3374]
n=2
+
B[365.3374]
n=2
Permethylated
Oligosaccharides
1796.9044 (A
n=2
B
n=2
)
=? +
A[449.2261]
n=2
+
B[449.2261]
n=2
1797.9944 (A
n=2
B
n=2
)
=? +
A[449.4986]
n=2
+
B[449.4986]
n=2
Peracetylated
Oligosaccharides
2300.7395 (A
n=2
B
n=2
)
=? +
A[575.1849]
n=2
+
B[575.1849]
n=2
2302.0947 (A
n=2
B
n=2
)
=? +
A[575.5237]
n=2
+
B[575.5237]
n=2
Glycan Motifs
Motif ID
Structure / SubStructure Name
Note
JCGG-MOTIF1002
α1,6-fucosylated N-glycan core structure
Reducing Terminal
JCGG-MOTIF4091
Terminal N-Acetyllactosamine
NON-Reducing Terminal
The number of Unknown information on Anomeric carbons, D/L isomers
1
External Links
GlycomeDB
(Structure)
GlycomeDB
24625
24625
KEGG
(Structure)
KEGG
G11901
G11901
CarbBank
CCSD
:
37013
Title
: Structure and localization of O- and N-linked oligosaccharide chains on basement membrane protein nidogen
Authors
: Fujiwara S; Shinkai H; Mann K; Timpl R
Info
: Matrix (1993) 13: 215-222
TAXID
: 10090
Other Data
: EHS tumor
Other Data
: 2010-12-17
©2008-2009 Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)
CompositionMass
Glycan MotifsThe number of Unknown information on Anomeric carbons, D/L isomers
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