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JCGGDB Glycan Structure
Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)
JCGGDB ID
JCGG-STR011364
version 2
Glycan Information
4
4
3
]
B
2
2
6
2
]
A
2
[
[
GlcNAc x-dglc-HEX-1:5 JCGG-MOTIF1001
GlcNAc b-dglc-HEX-1:5 JCGG-MOTIF1001
Man b-dman-HEX-1:5 JCGG-MOTIF1001
Man a-dman-HEX-1:5 JCGG-MOTIF1001
Man a-dman-HEX-1:5
Man a-dman-HEX-1:5 JCGG-MOTIF1001
Man a-dman-HEX-1:5
get Image
Composition
Hex 7 HexNAc 2
Mass Value Search
GlcNAc 2 Man 7
Structural Isomer Search
Mass
Monoisotopic Mass
Average Mass
Underivatised
Oligosaccharides
648.2112 (A
n=2
B
n=2
)
=? +
A[162.0528]
n=2
+
B[162.0528]
n=2
648.5696 (A
n=2
B
n=2
)
=? +
A[162.1424]
n=2
+
B[162.1424]
n=2
Permethylated
Oligosaccharides
816.3988 (A
n=2
B
n=2
)
=? +
A[204.0997]
n=2
+
B[204.0997]
n=2
816.892 (A
n=2
B
n=2
)
=? +
A[204.223]
n=2
+
B[204.223]
n=2
Peracetylated
Oligosaccharides
1152.338 (A
n=2
B
n=2
)
=? +
A[288.0845]
n=2
+
B[288.0845]
n=2
1153.0168 (A
n=2
B
n=2
)
=? +
A[288.2542]
n=2
+
B[288.2542]
n=2
Glycan Motifs
Motif ID
Structure / SubStructure Name
Note
JCGG-MOTIF1001
N-glycan core structure
Reducing Terminal
The number of Unknown information on Anomeric carbons, D/L isomers
1
External Links
GlycomeDB
(Structure)
GlycomeDB
20534
20534
KEGG
(Structure)
KEGG
G05023
G05023
CarbBank
CCSD
:
21676
Title
: Identification of distinct endoglycosidase (endo) activities in Flavobacterium meningosepticum: endo F1, endo F2, and endo F3. Endo F1 and endo H hydrolyze only high mannose and hybrid glycans
Authors
: Trimble RB; Tarentino AL
Info
: J Biol Chem (1991) 266: 1646-1651
Other Data
: 2010-12-17
©2008-2009 Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)
Composition
Glycan Motifs
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