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構造リスト
JCGGDB Glycan Structure
Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)
JCGGDB ID
JCGG-STR010480
version 2
Glycan Information
3
3
]
A
2
4
3
]
B
2
4
2
3
6
[
[
GalNAc x-dgal-HEX-1:5
Gal b-dgal-HEX-1:5
GlcNAc b-dglc-HEX-1:5
Gal b-dgal-HEX-1:5
GlcNAc b-dglc-HEX-1:5 JCGG-MOTIF5021,JCGG-MOTIF4094
Gal b-dgal-HEX-1:5 JCGG-MOTIF5021,JCGG-MOTIF4094
Neu5Ac a-dgro-dgal-NON-2:6|1:a|2:keto|3:d JCGG-MOTIF4094
SO3
SO3 sulfate
get Image
Composition
Hex 5 HexNAc 5 Neu5Ac 1 SO3 2
Mass Value Search
Gal 5 GalNAc 1 GlcNAc 4 Neu5Ac 1 SO3 2
Structural Isomer Search
Mass
Monoisotopic Mass
Average Mass
Underivatised
Oligosaccharides
1620.4424 (A
n=2
B
n=2
)
=? +
A[365.1322]
n=2
+
B[445.089]
n=2
1621.478 (A
n=2
B
n=2
)
=? +
A[365.3374]
n=2
+
B[445.4016]
n=2
Permethylated
Oligosaccharides
1928.7868 (A
n=2
B
n=2
)
=? +
A[449.2261]
n=2
+
B[515.1673]
n=2
1930.069 (A
n=2
B
n=2
)
=? +
A[449.4986]
n=2
+
B[515.5359]
n=2
Peracetylated
Oligosaccharides
2376.6322 (A
n=2
B
n=2
)
=? +
A[575.1849]
n=2
+
B[613.1312]
n=2
2378.1483 (A
n=2
B
n=2
)
=? +
A[575.5237]
n=2
+
B[613.5505]
n=2
Glycan Motifs
Motif ID
Structure / SubStructure Name
Note
JCGG-MOTIF5021
keratan sulfate (KS)/Gal-GlcNAc(6S)
SubStructure
JCGG-MOTIF4094
Sialyl 6-Sulfo LacNAc
NON-Reducing Terminal
The number of Unknown information on Anomeric carbons, D/L isomers
1
External Links
GlycomeDB
(Structure)
GlycomeDB
19719
19719
KEGG
(Structure)
KEGG
G03819
G03819
CarbBank
CCSD
:
31126
Title
: Structure of the O-linked carbohydrate chains of porcine zona pellucida glycoproteins
Authors
: Hokke R; Damm JBL; Penninkhof B; Aitken RJ; Kamerling JP; Vliegenthart JFG
Info
: Eur J Biochem (1994) 221: 491-512
TAXID
: 9823
Other Data
: zona pellucida
Other Data
: 2010-12-17
©2008-2009 Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)
CompositionMass
Glycan MotifsThe number of Unknown information on Anomeric carbons, D/L isomers
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