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JCGGDB Glycan Structure
Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)
JCGGDB ID
JCGG-STR010330
version 2
Glycan Information
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Composition
HexA 3 HexNAc 2 SO3 4
Mass Value Search
GalNAc 2 GlcA 3 SO3 4
Structural Isomer Search
Mass
Monoisotopic Mass
Average Mass
Underivatised
Oligosaccharides
1078.05 (A
n=2
)
=? +
A[539.025]
n=2
1078.8986 (A
n=2
)
=? +
A[539.4493]
n=2
Permethylated
Oligosaccharides
1190.1752 (A
n=2
)
=? +
A[595.0876]
n=2
1191.1136 (A
n=2
)
=? +
A[595.5568]
n=2
Peracetylated
Oligosaccharides
1246.0927 (A
n=2
)
=? +
A[623.0463]
n=2
1247.0476 (A
n=2
)
=? +
A[623.5238]
n=2
Glycan Motifs
Motif ID
Structure / SubStructure Name
Note
JCGG-MOTIF5001
Chondroitin Sulfate/A-unit
SubStructure
The number of Unknown information on Anomeric carbons, D/L isomers
1
External Links
GlycomeDB
(Structure)
GlycomeDB
19583
19583
KEGG
(Structure)
KEGG
G03654
G03654
CarbBank
CCSD
:
7191
Title
: Novel sulfated oligosaccharides contaning 3-O-sulfated glucuronic acid from King crab cartilage chondroitin sulfate K: unexpected degradation by chondroitinase ABC
Authors
: Sugahara K; Tanaka Y; Yamada S; Seno N; Kitagawa H; Haslam SM; Morris HR; Dell A
Info
: J Biol Chem (1996) 271: 26745-26754
TAXID
: 107258
Other Data
: cartilage
Other Data
: 2010-12-17
©2008-2009 Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)
CompositionMass
Glycan MotifsThe number of Unknown information on Anomeric carbons, D/L isomers
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