JCGG-STR009682:JCGGDB ID

JCGGDB Glycan Structure Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)

JCGGDB ID JCGG-STR009682

GlyTouCan G88242BL

version 2

Glycan Information

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Composition

Hex 5 HexNAc 4 Neu5Ac 1 dHex 1
Mass Value Search

Fuc 1 Gal 2 GlcNAc 4 Man 3 Neu5Ac 1
Structural Isomer Search

Mass

	Monoisotopic Mass	Average Mass
Underivatised Oligosaccharides	-	-
Permethylated Oligosaccharides	-	-
Peracetylated Oligosaccharides	-	-

Glycan Motifs

Motif ID	Structure / SubStructure Name	Note
JCGG-MOTIF1002	α1,6-fucosylated N-glycan core structure	Reducing Terminal
JCGG-MOTIF4091	Terminal N-Acetyllactosamine	NON-Reducing Terminal

The number of Unknown information on Anomeric carbons, D/L isomers

External Links

GlycomeDB (Structure)

GlycomeDB 18985 18985

KEGG (Structure)

KEGG G02708 G02708

CarbBank

CCSD : 1889

Title : high-resolution 1H-NMR spectroscopy in the structure analysis of carbohydrates derived from glycoproteins

Authors : Vliegenthart JFG; van Halbeek H; Dorland L

Info : IUPAC 27th (1979) : 253-262

Other Data : 2010-12-17

CCSD : 4654

Title : Structural study of the sugar chains of human lactoferrin: finding of four novel complex-type asparagine-linked sugar chains

Authors : Matsumoto A; Yoshima H; Takasaki S; Kobata A

Info : J Biochem (1982) 91: 143-155

TAXID : 9606 Genus Species : man Scientific Name : Homo sapiens Other Data : 2010-12-17

CCSD : 5380

Title : The asparagine-linked sugar chains of subcomponent C1q of the first component of human complement

Authors : Mizuochi T; Yonemasu K; Yamashita K; Kobata A

Info : J Biol Chem (1978) 253: 7404-7409

TAXID : 9606 Genus Species : man Scientific Name : Homo sapiens Other Data : complement C1q Other Data : 2010-12-17

CCSD : 5382

Title : Characterization of oligosaccharide units of p-N-collagen type III from dermatosparactic bovine skin

Authors : Shinkai H; Lapiere CM

Info : Biochim Biophys Acta (1983) 758: 30-36

TAXID : 9913 Other Data : skin Other Data : 2010-12-17

CCSD : 5383

Title : Subcomponents C1q of the first component of guinea pig and mouse complement. Comparative study of their asparagine-linked sugar chains

Authors : Yonemasu K; Yoshima H; Sasaki T

Info : Biochim Biophys Acta (1983) 756: 28-35

TAXID : 10090 Other Data : 2010-12-17

CCSD : 24632

Title : Heterogeneity of bovine lactotransferrin glycans. Characterization of substituted N-linked glycans

Authors : Coddeville B; Strecker G; Wieruszeski JM; Vliegenthart JFG; Van Halbeek H; Peter-Katalinic J; Egge H; Spik G

Info : Carbohydr Res (1992) 236: 145-164

TAXID : 9913 Other Data : milk Other Data : 2010-12-17

CCSD : 29404

Title : Structures of the N-linked oligosaccharides on porcine plasma vitronectin

Authors : Yoneda A; Ogawa H; Matsumoto I; Ishizuka I; Hase S; Seno N

Info : Eur J Biochem (1993) 218: 797-806

TAXID : 9823 Other Data : plasma Other Data : 2010-12-17

CCSD : 42421

Title : Carbohydrate moieties of porcine 32 kDa enamelin

Authors : Yamakoshi Y

Info : Calcif Tissue Int (1995) 56: 323-330

TAXID : 9823 Other Data : tooth Other Data : 2010-12-17