JCGG-STR009159:JCGGDB ID

JCGGDB Glycan Structure Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)

Glycan Information

Glyco Tree get Image

Composition

Hex 7 HexNAc 3
Mass Value Search

Gal 6 Glc 1 GlcNAc 3
Structural Isomer Search

Descriptors Computed from Structure

InChIKey	IYAYUJFRNIIOBE-XBMXKGEWSA-N
InChI	InChI=1S/C66H111N3O51/c1-14(79)67-27-36(88)49(113-63-46(98)54(33(85)20(7-73)106-63)119-61-43(95)39(91)30(82)17(4-70)104-61)23(10-76)109-58(27)102-13-26-35(87)56(118-60-29(69-16(3)81)37(89)50(24(11-77)111-60)114-64-47(99)55(34(86)21(8-74)107-64)120-62-44(96)40(92)31(83)18(5-71)105-62)48(100)66(112-26)115-51-25(12-78)110-59(28(38(51)90)68-15(2)80)117-53-32(84)19(6-72)108-65(45(53)97)116-52-22(9-75)103-57(101)42(94)41(52)93/h17-66,70-78,82-101H,4-13H2,1-3H3,(H,67,79)(H,68,80)(H,69,81)/t17-,18-,19-,20-,21-,22-,23-,24-,25-,26-,27-,28-,29-,30+,31+,32+,33+,34+,35+,36-,37-,38-,39+,40+,41-,42-,43-,44-,45-,46-,47-,48-,49-,50-,51-,52-,53+,54+,55+,56+,57-,58-,59+,60+,61-,62-,63+,64+,65+,66+/m1/s
SMILES	CC(=O)N[C@@H]1[C@@H](O)[C@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@H]3O[C@H](CO)[C@H](O)[C@H](O)[C@H]3O)[C@H]2O)[C@@H](CO)O[C@H]1OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](NC(C)=O)[C@H](O[C@H]3[C@@H](O)[C@@H](CO)O[C@@H](O[C@H]4[C@H](O)[C@@H](O)[C@H](O)O[C@@H]4CO)[C@@H]3O)O[C@@H]2CO)[C@H](O)[C@@H](O[C@@H]2O[C@H](CO)[C@@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O[C@H]4O[C@H](CO)[C@H](O)[C@H](O)[C@H]4O)[C@H]3O)[C@H](O)[C@H]2NC(C)=O)[C@H]1O

Mass

	Monoisotopic Mass	Average Mass
Underivatised Oligosaccharides	1761.6183	1762.597
Permethylated Oligosaccharides	2210.1194	2211.4568
Peracetylated Oligosaccharides	2979.9248	2981.6777

Glycan Motifs

Motif ID	Structure / SubStructure Name	Note
JCGG-MOTIF3009	neolacto	Reducing Terminal
JCGG-MOTIF4062	Paragloboside	Reducing Terminal
JCGG-MOTIF4099	Alpha-Galactosyl Epitope	NON-Reducing Terminal

External Links

JCGG	JCGG JGD-000810 JGD-000810 Reducing terminal: (b-1)Cer

LipidBank (Spectral Data)

LipidBank GSG1350 GSG1350

Description: Gala1-3Galb1-4GlcNAcb1-3(Gala1-3Galb1-4GlcNAcb1-6)Galb1-4GlcNAcb1-3Galb1-4GlcCer
Reducing terminal: (b-)Cer

GlycomeDB (Structure)

GlycomeDB 1851 1851

KEGG (Structure)

KEGG G10428 G10428

PACDB(Pathogen adhesion)

Pathogen:	Mycoplasma pneumoniae (M129; virulent)
Glycan Name:	I-active Gal2-lactoisooctaosyl ceramide [ Not Binding]

CarbBank

CCSD : 1739

Title : Isolation and Characterization of an I-active Ceramide Decasaccharide from Rabbit Erythrocyte Membrane

Authors : Hanfland P; Egge H; Dabrowski U; Kuhn S; Roelcke D; Dabrowski J

Info : Biochemistry (1981) 20: 5310-5319

TAXID : 9986 Other Data : erythrocyte Other Data : 2010-12-17

CCSD : 8581

Title : Glycosphingolipids in cellular interaction, differentiation, and oncogenesis

Authors : Hakomori SI

Info : Ann Rev Biochem (1981) 50: 733-764

Other Data : 2010-12-17

CCSD : 9292

Title : A multiplicity of erythrocyte glycolipids of the neolacto series revealed by immuno-thin-layer chromatography with monoclonal anti-I and anti-i antibodies

Authors : Uemura K; Childs RA; Hanfland P; Feizi T

Info : Biosci Rep (1983) 3: 577-588

Other Data : erythrocyte Other Data : 2010-12-17

CCSD : 13325

Title : Structural analysis of blood-group ABH, I, i, lewis and related glycosphingolipids. Application of FAB mass spectrometry and high resolution proton NMR

Authors : Egge H; Dabrowski J; Hanfland P

Info : Pure Appl Chem (1984) 56: 807-819

TAXID : 9986 Other Data : erythrocyte Other Data : 2010-12-17

CCSD : 13994

Title : Toxin A from Clostridium difficile binds to rabbit erythrocyte glycolipids with terminal Gal.alpha.1-3Gal.beta.1-4GlcNAc sequences

Authors : Clark GF; Krivan HC; Wilkins TD; Smith DF

Info : Arch Biochem Biophys (1987) 257: 217-229

Other Data : 2010-12-17

CCSD : 16369

Title : Identification of erythrocyte Gal.alpha.1-3Gal glycosphingolipids with a mouse monoclonal antibody, Gal-13

Authors : Galili U; Basbaum CB; Shohet SB; Buehler J; Macher BA

Info : J Biol Chem (1987) 262: 4683-4688

Other Data : 2010-12-17

CCSD : 16885

Title : Lipooligosaccharides (LOS) of Neisseria gonorrhoeae and Neisseria meningitidis have components that are immunochemically similar to precursors of human blood-group antigens. Carbohydrate sequence specificity of the mouse monoclonal antibodies that recognize crossreacting antigens on LOS and human erythrocytes

Authors : Mandrell RE; Griffiss JML; Macher BA

Info : J Exp Med (1988) 168: 107-126

Other Data : 2010-12-17

CCSD : 17337

Title : Correlated proton-carbon-13 NMR spectroscopy of peracetylated glycosphingolipids at 500 MHz

Authors : Dabrowski J; Dabrowski U; Hanfland P; Kordowicz M; Hull WE

Info : Magn Reson Chem (1986) 24: 729-733

Other Data : 2010-12-17

CCSD : 17653

Title : Characterization of a polyclonal anti-Gal-.alpha.1-3Gal antibody from chicken

Authors : Bouhours JF; Richard C; Ruvoen N; Barreau N; Naulet J; Bouhours D

Info : Glycoconj J (1998) 15: 93-99

TAXID : 9986 Other Data : red blood cells Other Data : 2010-12-17

CCSD : 25294

Title : Cell surface binding site for Clostridium difficile enterotoxin: evidence for a glycoconjugate containing the sequence Gal.alpha.1-3Gal.beta.1-4GlcNAc

Authors : Krivan HC; Clark GF; Smith DF; Wilkins TD

Info : Infect Immun (1986) 53: 573-581

Other Data : 2010-12-17

CCSD : 25536

Title : Adhesion of Mycoplasma pneumoniae to sulfated glycolipids and inhibition by dextran sulfate

Authors : Krivan HC; Olson LD; Barile MF; Ginsburg V; Roberts DD

Info : J Biol Chem (1989) 264: 9283-9288

Other Data : 2010-12-17

CCSD : 25595

Title : Regulation of the expression of Gal.alpha.1-3Gal.beta.1-4GlcNAc glycosphingolipids in kidney

Authors : Hendricks SP; He P; Stults CLM; Macher BA

Info : J Biol Chem (1990) 265: 17621-17626

Other Data : kidney Other Data : 2010-12-17

CCSD : 32002

Title : Electrospray mass spectrometry of pentacosasaccharides of blood group I-activity and related compounds

Authors : Ii T; Ohashi Y; Matsuzaki Y; Ogawa T; Nagai Y

Info : Org Mass Spectrom (1993) 28: 1340-1344

Other Data : 2010-12-17

CCSD : 37850

Title : Studies of the binding specificity of the soluble 14000-dalton bovine heart muscle lectin using immobilised glycolipids and neoglycolipids

Authors : Solomon JC; Stoll MS; Penfold P; Abbott WM; Childs RA; Hanfland P; Feizi T

Info : Carbohydr Res (1991) 213: 293-307

Other Data : 2010-12-17

CCSD : 38039

Title : Characterization of the specificity of binding of Moluccella laevis lectin to glycosphingolipids

Authors : Teneberg S; Leonardsson I; Angstrom J; Ehrlich-Rogozinski S; Sharon N

Info : Glycoconj J (1994) 11: 418-423

TAXID : 9986 Other Data : erythrocyte Other Data : 2010-12-17

JCGGDB ID JCGG-STR009159

Glycan Information

External Links