JCGG-STR000545:JCGGDB ID

JCGGDB Glycan Structure Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)

Glycan Information

Glyco Tree get Image

Composition

Hex 3 HexNAc 1 Neu5Ac 1 Neu5Gc 1
Mass Value Search

Gal 2 GalNAc 1 Glc 1 Neu5Ac 1 Neu5Gc 1
Structural Isomer Search

Descriptors Computed from Structure

InChIKey	XHHAHWCVEHZKMY-OXKWADBZSA-N
InChI	InChI=1S/C48H79N3O38/c1-12(59)49-23-14(61)3-47(45(75)76,86-37(23)26(66)16(63)5-52)88-39-29(69)19(8-55)81-43(32(39)72)85-36-25(50-13(2)60)42(80-18(7-54)28(36)68)84-35-21(10-57)82-44(83-34-20(9-56)79-41(74)31(71)30(34)70)33(73)40(35)89-48(46(77)78)4-15(62)24(51-22(65)11-58)38(87-48)27(67)17(64)6-53/h14-21,23-44,52-58,61-64,66-74H,3-11H2,1-2H3,(H,49,59)(H,50,60)(H,51,65)(H,75,76)(H,77,78)/t14-,15-,16+,17+,18+,19+,20+,21+,23+,24+,25+,26+,27+,28-,29-,30+,31+,32+,33+,34+,35-,36+,37+,38+,39-,40+,41+,42-,43-,44-,47-,48-/m0/s
SMILES	CC(=O)N[C@@H]1[C@@H](O)C[C@@](O[C@H]2[C@@H](O)[C@@H](CO)O[C@@H](O[C@H]3[C@@H](O)[C@@H](CO)O[C@@H](O[C@H]4[C@@H](CO)O[C@@H](O[C@@H]5[C@@H](CO)O[C@@H](O)[C@H](O)[C@H]5O)[C@H](O)[C@H]4O[C@@]4(C[C@H](O)[C@@H](NC(=O)CO)[C@@H](O4)[C@H](O)[C@H](O)CO)C(O)=O)[C@@H]3NC(C)=O)[C@@H]2O)(O[C@H]1[C@H](O)[C@H](O)CO)C(O)=O

Mass

	Monoisotopic Mass	Average Mass
Underivatised Oligosaccharides	1305.434	1306.1526
Permethylated Oligosaccharides	1655.8254	1656.8245
Peracetylated Oligosaccharides	2145.6455	2146.8982

Glycan Motifs

Motif ID	Structure / SubStructure Name	Note
JCGG-MOTIF3003	ganglio	Reducing Terminal
JCGG-MOTIF4042	N-Glycolyl GM2	Reducing Terminal
JCGG-MOTIF4114	Neu5Ac(a2-3)Gal(b1)	NON-Reducing Terminal

External Links

JCGG	JCGG JGD-000724 JGD-000724 Reducing terminal: (b-1)Cer

LipidBank (Spectral Data)

LipidBank GSG1228 GSG1228

Description: NeuAc2-3Galb1-3GalNAcb1-4(NeuGc2-3)Galb1-4GlcCer
Reducing terminal: (b-)Cer

GlycomeDB (Structure)

GlycomeDB 1049 1049

KEGG (Structure)

KEGG G00978 G00978

CarbBank

CCSD : 1057

Title : Disialogangliosides in bovine adrenal medulla

Authors : Ariga T; Sekine M; Yu RK; Miyatake T

Info : J Biol Chem (1982) 257: 2230-2235

TAXID : 9913 Other Data : adrenal medulla Other Data : 2010-12-17

CCSD : 1058

Title : Structure of gangliosides from bovine adrenal medulla

Authors : Price H; Kundu SK; Ledeen R

Info : Biochemistry (1975) 14: 1512-1518

TAXID : 9913 Other Data : adrenal medulla Other Data : 2010-12-17

CCSD : 7404

Title : Fluorometric high-performance liquid chromatography of N-acetyl-and N- glycolylneuraminic acids and its application to their microdetermination in human and animal sera, glycoproteins, and glycolipids

Authors : Hara S; Takemori Y; Yamaguchi M; Nakamura M; Ohkura Y

Info : Anal Biochem (1987) 164: 138-145

TAXID : 9913 Other Data : brain Other Data : 2010-12-17

CCSD : 9154

Title : Gangliosides of hog skeletal muscle

Authors : Nakamura K; Nagashima M; Sekine M; Igarashi M; Ariga T; Atsumi T; Miyatake T; Suzuki A; Yamakawa T

Info : Biochim Biophys Acta (1983) 752: 291-300

TAXID : 9823 Other Data : muscle Other Data : 2010-12-17

CCSD : 14552

Title : Gangliosides of murine B-lymphoma MOPC-406

Authors : Dyatlovitskaya EV; Somova OG; Kogtev LS; Bergelson LD

Info : Biochemistry (Mosc) (1986) 51: 1308-1314

TAXID : 10090 Other Data : B-lymphoma Other Data : 2010-12-17

CCSD : 25781

Title : Improved method for large-scale purification of brain gangliosides by Q-Sepharose column chromatography. Immunochemical detection of C-series polysialogangliosides in adult bovine brains

Authors : Hirabayashi Y; Nakao T; Matsumoto M; Obata K; Ando S

Info : J Chromatogr (1988) 445: 377-384

TAXID : 9913 Other Data : brain Other Data : 2010-12-17

CCSD : 40443

Title : In situ accessibility of murine macrophage gangliosides

Authors : Macala LJ; Yohe HC

Info : Glycobiology (1995) 5: 67-75

TAXID : 10090 Other Data : macrophage Other Data : 2010-12-17

JCGGDB ID JCGG-STR000545

Glycan Information

External Links