JCEG ID |
JCEG055 |
Name |
T07A5.1
WormBase
NCBI Gene
|
Human Ortholog |
GGDB:FCMD
OMIM:
253800
607440
611588
611615
613152
OrthoList :
FKTN
(Ensembl Compara)
GGDB |
Score |
E-val |
FCMD
|
91 |
4e-20 |
Option tblastn : Query Worm Protein, Subject GGDB mRNA, E-val < 0.00001
|
Family Name |
Fukutin |
Locus Tag |
T07A5.1
|
RNAi phenotype |
phenotype
|
|
Microscope observation (Image)
|
|
COPAS (Image)
|
Normal
|
hsp-4::GFP (Image)
|
|
|
Sequence Features |
kr:Detected
tm:Detected
gg_motif:M1, M6
dxd:Detected
|
Sequence |
CDS
atgaatccccgtcttcgagtttatatttttgctggtattttcctatttat tgcacttataatattaattaaaatatttttcgaagaagaaaagtttgatg ttcttgtagtttctctagactcaaaagaaaaaacctcgaaagaatgccta tcaaatctccaatcagtttctattccggtcccagcactaatcattgataa gactgtcttaaaagcaatctaccaagaaaattgtgagcatatttttgaac ggaaaattaagattggtattgataagagaaattggaaattgatagcgaat cataatgaatcatcaattttcgaatgtattcggatggaaaataagacgag taatgattatttgcaatttgatacacaacctgcacgtgctgttctgaaaa acttcaacacattttccatagggaatcttcatatcccaagtaatatccca ttgtttctcaaaatgtgggaacgatctgaaattcggggctgcttaaatct aattgtgcacagaaatatgacaaagagtcagcagtttaatcacgggaaag aggcagctgagaagctcgccgagttcagggacgtgcttttgacgttcaat atgttcgcttttttgaatggaggaactttgttaggttggtatcgtgaatg cggttttatacctcacactgctgacattgacttggcaatgttcgctgaag attttcacccagaaatcacacatttcctactgtctcggacatcttcgttt cagctattgcgaagtctaggaatgcttaatgactcctatgaactcacggt gaccccaaaaaccgggtatattgtgaatatggatttatttttgatgtata aggatgtgcacaaaaacggaagtgtcatcaattgggtcggcggagcaagc aatgacataaaatacaagtacacctacccggcatatgatccctggtgtgc tgcagatcttcacgggcacctattctgggtgacctgttccccacagaaaa tgctcgtgttcgagtacggtaacctatggtacgaagaccacccaagtagc caatacgactggcggagcacagcaaagaatgtgagaacgaacgggctgtg gagtgatgtggaattgaaaaatgtttccaaattatattaa
|
Protein
MNPRLRVYIFAGIFLFIALIILIKIFFEEEKFDVLVVSLDSKEKTSKECLSNLQSVSIPV PALIIDKTVLKAIYQENCEHIFERKIKIGIDKRNWKLIANHNESSIFECIRMENKTSNDY LQFDTQPARAVLKNFNTFSIGNLHIPSNIPLFLKMWERSEIRGCLNLIVHRNMTKSQQFN HGKEAAEKLAEFRDVLLTFNMFAFLNGGTLLGWYRECGFIPHTADIDLAMFAEDFHPEIT HFLLSRTSSFQLLRSLGMLNDSYELTVTPKTGYIVNMDLFLMYKDVHKNGSVINWVGGAS NDIKYKYTYPAYDPWCAADLHGHLFWVTCSPQKMLVFEYGNLWYEDHPSSQYDWRSTAKN VRTNGLWSDVELKNVSKLY
|
References |
|
Functional Descriptions |
T07A5.1
none available
|
Deletion Mutants |
|
In Situ |
|
Expression |
Expression
db_name |
wbbt |
name |
def |
reliability |
expr_pattern |
paper |
WormAtlas |
WB |
WBbt:0005733
|
hypodermis |
"epidermal layer" [WB:pws] |
Enriched |
WBPaper00037950 : hypodermis_larva_SelectivelyEnriched, hypodermis_larva_enriched
|
WBPaper00037950
|
|
|
WBGene00011554
Phenotype
Homology_paralog
|
|
Phenotype |
Definition |
RNAi / Allele |
embryonic development variant
|
"Variations in the progression of an embryo over time, from zygote formation to hatching compared to control." [GO:0009790, WB:WBPerson2021]
|
|
embryonic lethal
|
"Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die." [WB:cab, WB:WBPaper00000179, WB:WBPaper00004403, WB:WBPaper00004540, WB:WBPaper00004651, WB:WBPaper00004769, WB:WBPaper00005654, WB:WBPaper00024497, WB:WBPaper00024925, WB:WBPaper00025054]
|
|
maternal sterile
|
" Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility)." [WB:cab, WB:cgc5599, WB:cgc7141, WB:WBPerson557]
|
|
organism morphology variant
|
"Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals." [WB:cab, WB:WBPaper00004402, WB:WBPaper00004403, WB:WBPaper00004651, WB:WBPaper00005654, WB:WBPaper00006395]
|
|
postembryonic development variant
|
"Any variation in the progression of an animal over time, from hatching to adulthood, compared to control." [WB:WBPerson2021]
|
|
Variant
|
"Animals exhibit variations compared to a given control." [WB:WBPerson557]
|
|