links



Bacterium
Fungus
Virus
Toxin



Contents
PACDB is included below.
Version: 1.1 (Last updated on:March 1 2010)
Diseases : 99
Scientific Names: 128
Glycans and Glycoproteins: 101
Information on the interaction between Pathogen and Glycans (Glycoproteins): 1713
Extraction from 216 References

Deleted Entry
Bacteriophage (2014/08/15)




PACDB REF. IDPathogen Adherence MoleculeGlycan/Glycoprotein Ligand
5Actinobacillus pleuropneumoniae
(serotype 1:4074/serotype 2:4226)
Binding
Glycan-Glycan interaction:LPS
Galactosyl ceramide (type I/II; ; hydroxylated/non-hydroxylated fatty acids)
Gal(b1-1)Cer [ Binding ]
10Escherichia coli
(Uropathogenic(UPEC); K12/HB101(pPIL110-54))
Binding
Adhesin:F1C
Genomic Name:foc (cluster of 8 genes)
Galactosyl ceramide (type II; non-hydroxylated fatty acids)
Gal(b1-1)Cer [ Binding ]
10Escherichia coli
(Uropathogenic(UPEC); K12/HB101(pPIL110-54))
Binding
Adhesin:F1C
Genomic Name:foc (cluster of 8 genes)
Galactosyl ceramide (type I; hydroxylated fatty acids)
Gal(b1-1)Cer [ Binding ]
25Borrelia burgdorferi
Binding
Unclassfied Protein:Unknown
Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Binding ]
25Borrelia hermsii
Binding
Unclassfied Protein:Unknown
Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Binding ]
34Human immunodeficiency virus
(type 1(HIV-1))
Binding
Unclassfied Protein:gp120
Human U373-MG glioma and SK-N-MC neuroblastoma cells, Human colon epithelial HT29 cells Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Binding ]
34Escherichia coli
Binding
Fimbria:S-fimbriae
Adhesin:SfaA
Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Binding ]
34Escherichia coli
Binding
Adhesin:F1C
Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Binding ]
47Actinomyces naeslundii
(ATCC 12104)
Not Binding
Unclassfied Protein:Unknown
Most tissues Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Not Binding ]
47Actinomyces viscosus
(ATCC 19246)
Not Binding
Unclassfied Protein:Unknown
Most tissues Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Not Binding ]
48Neisseria gonorrhoeae
Not Binding
Adhesin:Lectin-like proteins (adhesin)
Gonorrhoeae patients Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Not Binding ]
48Propionibacterium granulosum
Not Binding
Adhesin:Lectin-like proteins (adhesin)
Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Not Binding ]
49Mycoplasma pneumoniae
(M129; virulent)
Not Binding
Unclassfied Protein:Unknown
Human colon adenocarcinoma cells (WiDr ) Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Not Binding ]
72Human immunodeficiency virus
(type 1(HIV-1); IIIB)
Binding
Adhesin:gp120
Human colonic epithelial cell lines (HT-29/HT-29-A7/HT-29-D4) Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Binding ]
76Burkholderia cepacia
(BC5/BC7/BC61/NBC1/NBC2/NBC3)
Binding
Adhesin:Lectin-like proteins (adhesin)
Sputa of cystic fibrosis patients Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Binding ]
76Burkholderia cepacia
(BC5/BC7/BC61/NBC1/NBC2/NBC3)
Binding
Adhesin:Lectin-like proteins (adhesin)
Sputa of cystic fibrosis patients Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Binding ]
91Escherichia coli
(HB101(pDG1))
Binding
Adhesin:PsaA/B (pH-6 antigen)
Genomic Name:psaA/B
Galactosyl ceramide (type II; non-hydroxylated fatty acids)
Gal(b1-1)Cer [ Binding ]
91Escherichia coli
(HB101(pDG1))
Binding
Adhesin:PsaA/B (pH-6 antigen)
Genomic Name:psaA/B
Galactosyl ceramide (type I/II; ; hydroxylated/non-hydroxylated fatty acids)
Gal(b1-1)Cer [ Binding ]
91Yersinia pestis
(pH6 antigen from Escherichia coli(HB101))
Binding
Adhesin:PsaA/B (pH-6 antigen)
Genomic Name:psaA/B
Galactosyl ceramide (type I; hydroxylated fatty acids)
Gal(b1-1)Cer [ Binding ]
91Yersinia pestis
(pH6 antigen from Escherichia coli(HB101))
Not Binding
Adhesin:PsaA/B (pH-6 antigen)
Genomic Name:psaA/B
Galactosyl ceramide (type II; non-hydroxylated fatty acids)
Gal(b1-1)Cer [ Not Binding ]
103Rotavirus
(Neuraminidase-insensitive; bovine:UK(P5/G6))
Not Binding
Unclassfied Protein:Unknown
Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Not Binding ]
103Rotavirus
(Neuraminidase-sensitive; simian:SA11(P2/G3) / bovine:NCDV(P1/G6))
Not Binding
Unclassfied Protein:Unknown
Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Not Binding ]
104Borrelia burgdorferi
(B31/ESP1/TI1)
Binding
Unclassfied Protein:Unknown
Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Binding ]
106Propionibacterium granulosum
Not Binding
Unclassfied Protein:Unknown
Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Not Binding ]
106Propionibacterium freudenreichii
Not Binding
Unclassfied Protein:Unknown
Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Not Binding ]
113Human immunodeficiency virus
(type 1(HIV-1))
Binding
Unclassfied Protein:HIV surface glycoprotein gp120
Neural cell lines Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Binding ]
114Human immunodeficiency virus
(type 1(HIV-1))
Binding
Unclassfied Protein:Unknown
Human colon epithelial HT29 cells Galactosyl ceramide (or a derivative)
Gal(b1-1)Cer [ Binding ]
115Human immunodeficiency virus
(type 1(HIV-1))
Binding
Unclassfied Protein:Envelope glycoprotein gp120
Neural receptor Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Binding ]
117Escherichia coli
(Uropathogenic(UPEC); ARD6; serotype O6:K13:H1)
Binding
Adhesin:F1C
Human kidney Galactosyl ceramide t18:0-h22:0-h24:0
Gal(b1-1)Cer [ Binding ]
117Escherichia coli
(Uropathogenic(UPEC); ARD6; serotype O6:K13:H1)
Not Binding
Adhesin:F1C
Sigma Galactosyl ceramide d18:1-h18:0-h24:0
Gal(b1-1)Cer [ Not Binding ]
120Escherichia coli
(HB101/13(K12))
Binding
Fimbria:S-fimbriae (SfaA)
Genomic Name:sfaA
Brain endothelial cells Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Binding ]
137Cytomegalovirus
(HCMV; human)
Binding
Unclassfied Protein:Unknown
Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Binding ]
259Borrelia burgdorferi
Binding
Unclassfied Protein:"OspA, OspB, OspC"
Galactosyl ceramide (Galactocerebroside)
Gal(b1-1)Cer [ Binding ]

Copyright © 2010 JCGGDB & AIST. All Rights Reserved.

/ Creative Commons License