JCEG ID JCEG054
Name T07D3.4      WormBase    NCBI Gene
Human Ortholog

GGDB:FCMD 

OMIM: 253800 607440 611588 611615 613152

OrthoList :   FKTN  (Ensembl Compara)

GGDB Score E-val
FCMD 97 5e-22
Option tblastn : Query Worm Protein, Subject GGDB mRNA, E-val < 0.00001
Family Name Fukutin
Locus Tag T07D3.4
RNAi phenotype
phenotype WT
Microscope observation (Image)
COPAS (Image)

Normal

hsp-4::GFP (Image)
Sequence Features tm:Detected
dxd:Detected
kr:Detected
gg_motif:M1, M3, M6
Sequence CDS
Protein
References

WormBase (WS254)

Functional Descriptions T07D3.4

T07D3.4 is orthologous to the human gene, Fukutin (FKTN, also called FCMD).
Deletion Mutants ok664
In Situ In Situ   
Expression Expression
db_name wbbt name def reliability expr_pattern paper WormAtlas
WB WBbt:0005451

pharyngeal muscle cell "type of cells that make up muscle layers in the pharynx." [WB:rynl] Enriched WBPaper00037950 : pharyngeal-muscle_embryo_enriched
WBPaper00037950 WormAtlas
WB WBbt:0005772

intestine "A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages." [WBPaper:00038216] Enriched WBPaper00026980 : intestine_enriched
WBPaper00026980 WormAtlas
WB WBbt:0005772

intestine "A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages." [WBPaper:00038216] Enriched WBPaper00037950 : intestine_CoreEnriched, intestine_embryo_enriched, intestine_larva_enriched
WBPaper00037950 WormAtlas
WB WBbt:0005772

intestine "A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages." [WBPaper:00038216] Enriched WBPaper00040985 : AIN-2_L4_intestine, AIN-2_asynchronous_intestine
WBPaper00040985 WormAtlas
WB WBbt:0006819

AVE "Neuron class of two interneurons with cell bodies situated in the lateral ganglion close to the ring neuropile." [WB:Paper00000938] Enriched WBPaper00037950 : AVE-neuron_embryo_enriched
WBPaper00037950
WB WBbt:0006831

PVD "Neuron class of two interneurons with cell bodies situated laterally in the posterior body." [WB:Paper00000938] Enriched WBPaper00036375 : enriched_in_PVD_OLL
WBPaper00036375
WB WBbt:0006847

OLL "Neuron class of two neurons with ciliated endings in the lateral outer labial sensilla." [WB:Paper00000938] Enriched WBPaper00036375 : enriched_in_PVD_OLL
WBPaper00036375

WBGene00020307
Phenotype
Homology_paralog

Observed Observed and NOT Observed
Phenotype Definition RNAi / Allele


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