JCEG ID JCEG019
Name C16D9.6      WormBase    NCBI Gene
Human Ortholog

GGDB:C1GALT1 

OMIM:

OrthoList :   C1GALT1C1  (Ensembl Compara)

GWAS Catalog
STREAMRAFp-valueORBETACIStudy
DOWNSTREAM 0.0000002 (PCB105) 1.32 (unit decrease) [0.83-1.81] 25839716
MAPPED 0.46 0.000004 [NR] 19010793
MAPPED 0.444 0.000001 0.099 (unit decrease) [0.06-0.138] 24159190
MAPPED 0.444 0.0000006 0.101 (unit increase) [0.062-0.14] 24159190
GGDB Score E-val
C1GALT1 132 8e-33
C1GALT1C1 92 1e-20
CHSY1 78 2e-16
CSS3 59 8e-11
B3GNT4 50 5e-08
B3GLCT 50 6e-08
CSGlcA-T 44 4e-06
Option tblastn : Query Worm Protein, Subject GGDB mRNA, E-val < 0.00001
Family Name Core 1 GalT
Locus Tag C16D9.6
RNAi phenotype
phenotype WT
Microscope observation (Image)
COPAS (Image)
hsp-4::GFP (Image)
Sequence Features kr:N.D.
tm:Detected
dxd:DDD
gg_motif:M1,M3,M4,M6
Sequence CDS
Protein
References

WormBase (WS254)

Functional Descriptions C16D9.6

none available
Deletion Mutants
In Situ
Expression Expression
db_name wbbt name def reliability expr_pattern paper WormAtlas
WB WBbt:0003679

neuron "Major cell type of nervous tissue, specialized for transmission of information in the form of patterns of impulses." [ISBN:0140512888] Enriched WBPaper00030839 : Larval_Pan_Neuronal
WBPaper00030839 WormAtlas
WB WBbt:0003679

neuron "Major cell type of nervous tissue, specialized for transmission of information in the form of patterns of impulses." [ISBN:0140512888] Enriched WBPaper00031532 : Larva_Pan_Neuronal_Enriched
WBPaper00031532 WormAtlas
WB WBbt:0003679

neuron "Major cell type of nervous tissue, specialized for transmission of information in the form of patterns of impulses." [ISBN:0140512888] Enriched WBPaper00037950 : all-neurons_larva_enriched
WBPaper00037950 WormAtlas
WB WBbt:0006746

dopaminergic neuron "Neuron that uses dopamine (DA) as a neurotransmitter." [WB:rynl] Enriched WBPaper00037950 : dopaminergic-neurons_larva_enriched
WBPaper00037950
WB WBbt:0006804

body wall muscle cell "type of 95 cells that make up muscles of the body wall." [WB:rynl] Enriched WBPaper00037950 : bodywall-muscle_larva_enriched
WBPaper00037950

WBGene00015861
Phenotype
Homology_paralog

Observed Observed and NOT Observed
Phenotype Definition RNAi / Allele


Top




Insert title here