| JCEG ID |
JCEG008 |
| Name |
T08D2.2
WormBase
NCBI Gene
|
| Human Ortholog |
GGDB:DPAGT1
OMIM:
191350
608093
614750
OrthoList :
DPAGT1
(Ensembl Compara)
| GGDB |
Score |
E-val |
|
DPAGT1
|
143 |
1e-36 |
Option tblastn : Query Worm Protein, Subject GGDB mRNA, E-val < 0.00001
|
| Family Name |
Asparagine-linked glycosylation (ALG) genes |
| Locus Tag |
T08D2.2
|
| RNAi phenotype |
|
phenotype
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Microscope observation (Image)
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COPAS (Image)
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hsp-4::GFP (Image)
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| Sequence Features |
|
| Sequence |
CDS
gi|392925140|ref|NM_075654.2| Caenorhabditis elegans Protein T08D2.2 (T08D2.2) mRNA, complete cds
ATGACACTTGCAGTTGTATCGATTTTGGGACACTTCAGCAAGATTCTGATGCTCTTCTTCATTCCACAAA
TTATCAATTTCCTCTATTCAATTCCTCAACTTTTCCATTTGGTACCGTGTCCACGTCATCGACTACCGAA
ATATGACCCGAAAACTGATACAGTCAGTATGAGCGTCGCTGAATTCAAGAAAACCGATTTGAAACGAGTT
GGAGCACTTTTTATTACAATCTGCAAGTCTATTGGAATGCTTCATGTGAAAGAAGTGGAGAAGGATGGGG
AAATCTATCTCCAAATCAACAATCTGACAATCATCAATTTGGTGCTGAAATTCGCCGGACCCCTTCACGA
GAAGACCCTCAATGATGTGCTAATGAGCATTCAAATTCTGTGCTCATTACTCGCATTCTTTATTAGATTC
TATCTTGCTTCGTTGTTTTATGATGTTGTTGAATAG
|
Protein
MTLAVVSILGHFSKILMLFFIPQIINFLYSIPQLFHLVPCPRHRLPKYDPKTDTVSMSVAEFKKTDLKRV
GALFITICKSIGMLHVKEVEKDGEIYLQINNLTIINLVLKFAGPLHEKTLNDVLMSIQILCSLLAFFIRF
YLASLFYDVVE
|
| References |
|
| Functional Descriptions |
T08D2.2
none available
|
| Deletion Mutants |
|
| In Situ |
|
| Expression |
Expression
|
WBGene00011607
Phenotype
Homology_paralog
|
|
|
| Phenotype |
Definition |
RNAi / Allele |
|
embryonic lethal
|
"Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die." [WB:cab, WB:WBPaper00000179, WB:WBPaper00004403, WB:WBPaper00004540, WB:WBPaper00004651, WB:WBPaper00004769, WB:WBPaper00005654, WB:WBPaper00024497, WB:WBPaper00024925, WB:WBPaper00025054]
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larval arrest
|
"The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage." [WB:WBPaper00002958, WB:WBPerson2021]
|
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larval lethal
|
"The animal dies at any time between hatching and onset to adulthood." [GO:0002119, WB:WBPerson712]
|
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maternal sterile
|
" Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility)." [WB:cab, WB:cgc5599, WB:cgc7141, WB:WBPerson557]
|
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organism morphology variant
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"Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals." [WB:cab, WB:WBPaper00004402, WB:WBPaper00004403, WB:WBPaper00004651, WB:WBPaper00005654, WB:WBPaper00006395]
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postembryonic development variant
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"Any variation in the progression of an animal over time, from hatching to adulthood, compared to control." [WB:WBPerson2021]
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slow growth
|
"Any variation that causes a reduction in growth rate compared to control." [WB:cab, WB:WBPaper00004402, WB:WBPaper00004403, WB:WBPaper00004651, WB:WBPaper00004769, WB:WBPaper00005654, WB:WBPaper00006395, WB:WBPaper00024497, WB:WBPerson557]
|
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sterile progeny
|
"Any variation that compromises the reproductive ability of the progeny of an animal." [WB:WBPerson2021, WB:WBPerson557]
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Variant
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"Animals exhibit variations compared to a given control." [WB:WBPerson557]
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