JCEG ID |
JCEG004 |
Name |
K09E4.2
WormBase
NCBI Gene
|
Human Ortholog |
GGDB:ALG3
OMIM:
601110
608750
OrthoList :
ALG3
(Ensembl Compara)
GGDB |
Score |
E-val |
ALG3
|
296 |
1e-81 |
Option tblastn : Query Worm Protein, Subject GGDB mRNA, E-val < 0.00001
|
Family Name |
Asparagine-linked glycosylation (ALG) genes |
Locus Tag |
K09E4.2
|
RNAi phenotype |
phenotype
|
WT
|
Microscope observation (Image)
|
|
COPAS (Image)
|
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hsp-4::GFP (Image)
|
Normal
|
|
Sequence Features |
kr:Detected
tm:Detected
|
Sequence |
CDS
atgcgagagttaatctctcggctagtggttggcctattttcggtcaatga tacgggatttagagcagttgcggcgctgctgatgattgccgaagccgttt tatcacatttagtcattttaaaagttaattacaccgaaatcgactggagc acgtatatgcaacaagtcgagtgctacgtgaacaaggggatcctcaacta cacgcaaatcggcggtgacacgggtccctgcgtctacccggccggccatc tcttcgtcttccgcttgctccactttttcacgagctccggccgcaatatc cgcgcggctcagcacattttccaaggattctacatgtttaatctatttat ggtctttcgaatccttcacaagactatgcggatcccgccgatcgtgctgc ttctcgtgtcgatcaccggctatcggatacactcgattttcgtgttgcgg ctcttcaacgatcctctagctatgatgctcttctacgtggcaatggatcg gtttttggagcaaaaatggcttgtcggatgtgttttttatagcctggcag tatcgattaaaatgaacgtgttgcttttcgcgccggcgctgttcttcaca cttttgctcaacaatagttatatggcgacgttgggatatttgacagtttg cgggctaatccaactgtacgtcggtggcccattcctcctctacgactgga aatcgtatctgcaacaatccttcgatttgggccgagttttcatgttcaaa tggactgtcaactggcgattcttgcccgaagagtttttcctcgacaagcg attccacgcggcacttttggttgggcatttgacgtttttggcggttttcg cgtcgtacatgtggtttagacgcctaaacggtctccgcacctcggtctac ctacgtcttttcgaaggcatcaccaccaccacaggcgccgtcgagaccta ctacgccttctgtacctcaaatctgatcggaatcgccttctcccgatccc ttcactaccagttctacagttggtacttccatcagataccgttccttctc ttctgcgactatccccacgtggcaagtgtctccacgattccgtggcgtca atttctgtggaaagtaccgttgctcgccgccgtcgagctcagctggaacg tctatccatcgacgtggtggagttctgcgttgctccacgtttgccacgtc atcattttctggcatctaatcgtgacgagacccgcgcgacctggcgattc agtgtccagggagacgctccgaaggcttgagcagcggcagaaaatgcttg agcaagagctccgagagcatggacaagttgtgccgaaattcaaatttcca gcgtttttggaagagcagcaggaagagcaagtggatgttcggaagaggat gaagcagccgattggggagaagaggacgaaaaagcagttggatgcggaat ttgagacgtatttcgaggagcagatggacggatttcgggaggagcacacg atttattacacccacgatggaaaaccgcaagtttctgggcttgcaccact ggataagccggaaaaaatgaagatgcacgagaaagttgcagcattatata cgcaggcgctgaagctacaagctcaattaaatcccaatgaaactccaaca acatggaaatcattcaaatttcccaaaaatgccgacaaaaacctgctgga aagctatctgaagcttcacggagcaggagcacaacaagactctgaagaat ctgaaatttcctcagccgaagaagaagcttcagacgacgagaatagcggt gaggaagagcccaatacggagaaaattgagcaaaattcgtgtaaagctga agcctcggagcaagagagcaatggaggtgtgaggcggcgaattttggtcg attaa
atgcaacaagtcgagtgctacgtgaacaaggggatcctcaactacacgca aatcggcggtgacacgggtccctgcgtctacccggccggccatctcttcg tcttccgcttgctccactttttcacgagctccggccgcaatatccgcgcg gctcagcacattttccaaggattctacatgtttaatctatttatggtctt tcgaatccttcacaagactatgcggatcccgccgatcgtgctgcttctcg tgtcgatcaccggctatcggatacactcgattttcgtgttgcggctcttc aacgatcctctagctatgatgctcttctacgtggcaatggatcggttttt ggagcaaaaatggcttgtcggatgtgttttttatagcctggcagtatcga ttaaaatgaacgtgttgcttttcgcgccggcgctgttcttcacacttttg ctcaacaatagttatatggcgacgttgggatatttgacagtttgcgggct aatccaactgtacgtcggtggcccattcctcctctacgactggaaatcgt atctgcaacaatccttcgatttgggccgagttttcatgttcaaatggact gtcaactggcgattcttgcccgaagagtttttcctcgacaagcgattcca cgcggcacttttggttgggcatttgacgtttttggcggttttcgcgtcgt acatgtggtttagacgcctaaacggtctccgcacctcggtctacctacgt cttttcgaaggcatcaccaccaccacaggcgccgtcgagacctactacgc cttctgtacctcaaatctgatcggaatcgccttctcccgatcccttcact accagttctacagttggtacttccatcagataccgttccttctcttctgc gactatccccacgtggcaagtgtctccacgattccgtggcgtcaatttct gtggaaagtaccgttgctcgccgccgtcgagctcagctggaacgtctatc catcgacgtggtggagttctgcgttgctccacgtttgccacgtcatcatt ttctggcatctaatcgtgacgagacccgcgcgacctggcgattcagtgtc cagggagacgctccgaaggcttgagcagcggcagaaaatgcttgagcaag agctccgagagcatggacaagttgtgccgaaattcaaatttccagcgttt ttggaagagcagcaggaagagcaagtggatgttcggaagaggatgaagca gccgattggggagaagaggacgaaaaagcagttggatgcggaatttgaga cgtatttcgaggagcagatggacggatttcgggaggagcacacgatttat tacacccacgatggaaaaccgcaagtttctgggcttgcaccactggataa gccggaaaaaatgaagatgcacgagaaagttgcagcattatatacgcagg cgctgaagctacaagctcaattaaatcccaatgaaactccaacaacatgg aaatcattcaaatttcccaaaaatgccgacaaaaacctgctggaaagcta tctgaagcttcacggagcaggagcacaacaagactctgaagaatctgaaa tttcctcagccgaagaagaagcttcagacgacgagaatagcggtgaggaa gagcccaatacggagaaaattgagcaaaattcgtgtaaagctgaagcctc ggagcaagagagcaatggaggtgtgaggcggcgaattttggtcgattaa
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Protein
MRELISRLVVGLFSVNDTGFRAVAALLMIAEAVLSHLVILKVNYTEIDWSTYMQQVECYV NKGILNYTQIGGDTGPCVYPAGHLFVFRLLHFFTSSGRNIRAAQHIFQGFYMFNLFMVFR ILHKTMRIPPIVLLLVSITGYRIHSIFVLRLFNDPLAMMLFYVAMDRFLEQKWLVGCVFY SLAVSIKMNVLLFAPALFFTLLLNNSYMATLGYLTVCGLIQLYVGGPFLLYDWKSYLQQS FDLGRVFMFKWTVNWRFLPEEFFLDKRFHAALLVGHLTFLAVFASYMWFRRLNGLRTSVY LRLFEGITTTTGAVETYYAFCTSNLIGIAFSRSLHYQFYSWYFHQIPFLLFCDYPHVASV STIPWRQFLWKVPLLAAVELSWNVYPSTWWSSALLHVCHVIIFWHLIVTRPARPGDSVSR ETLRRLEQRQKMLEQELREHGQVVPKFKFPAFLEEQQEEQVDVRKRMKQPIGEKRTKKQL DAEFETYFEEQMDGFREEHTIYYTHDGKPQVSGLAPLDKPEKMKMHEKVAALYTQALKLQ AQLNPNETPTTWKSFKFPKNADKNLLESYLKLHGAGAQQDSEESEISSAEEEASDDENSG EEEPNTEKIEQNSCKAEASEQESNGGVRRRILVD
MQQVECYVNKGILNYTQIGGDTGPCVYPAGHLFVFRLLHFFTSSGRNIRAAQHIFQGFYM FNLFMVFRILHKTMRIPPIVLLLVSITGYRIHSIFVLRLFNDPLAMMLFYVAMDRFLEQK WLVGCVFYSLAVSIKMNVLLFAPALFFTLLLNNSYMATLGYLTVCGLIQLYVGGPFLLYD WKSYLQQSFDLGRVFMFKWTVNWRFLPEEFFLDKRFHAALLVGHLTFLAVFASYMWFRRL NGLRTSVYLRLFEGITTTTGAVETYYAFCTSNLIGIAFSRSLHYQFYSWYFHQIPFLLFC DYPHVASVSTIPWRQFLWKVPLLAAVELSWNVYPSTWWSSALLHVCHVIIFWHLIVTRPA RPGDSVSRETLRRLEQRQKMLEQELREHGQVVPKFKFPAFLEEQQEEQVDVRKRMKQPIG EKRTKKQLDAEFETYFEEQMDGFREEHTIYYTHDGKPQVSGLAPLDKPEKMKMHEKVAAL YTQALKLQAQLNPNETPTTWKSFKFPKNADKNLLESYLKLHGAGAQQDSEESEISSAEEE ASDDENSGEEEPNTEKIEQNSCKAEASEQESNGGVRRRILVD
|
References |
|
Functional Descriptions |
K09E4.2
none available
|
Deletion Mutants |
|
In Situ |
|
Expression |
Expression
|
WBGene00010720
Phenotype
Homology_paralog
|
|
Phenotype |
Definition |
RNAi / Allele |
embryonic lethal
|
"Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die." [WB:cab, WB:WBPaper00000179, WB:WBPaper00004403, WB:WBPaper00004540, WB:WBPaper00004651, WB:WBPaper00004769, WB:WBPaper00005654, WB:WBPaper00024497, WB:WBPaper00024925, WB:WBPaper00025054]
|
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larval arrest
|
"The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage." [WB:WBPaper00002958, WB:WBPerson2021]
|
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larval lethal
|
"The animal dies at any time between hatching and onset to adulthood." [GO:0002119, WB:WBPerson712]
|
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lethal
|
"Animals die prematurely at any stage of the life cycle." [WB:WBPaper00001109, WB:WBPerson2021]
|
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maternal sterile
|
" Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility)." [WB:cab, WB:cgc5599, WB:cgc7141, WB:WBPerson557]
|
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organism morphology variant
|
"Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals." [WB:cab, WB:WBPaper00004402, WB:WBPaper00004403, WB:WBPaper00004651, WB:WBPaper00005654, WB:WBPaper00006395]
|
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postembryonic development variant
|
"Any variation in the progression of an animal over time, from hatching to adulthood, compared to control." [WB:WBPerson2021]
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protein aggregation variant
|
"Variations that result in the accumulation of soluble/insoluble protein aggregates in a particular cell or tissue, compared to control. Protein aggregates are often formed by interactions between misfolded protein molecules and/or deficiencies in proper protein folding." [WB:WBPaper00034765, WB:WBPerson2021]
|
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slow growth
|
"Any variation that causes a reduction in growth rate compared to control." [WB:cab, WB:WBPaper00004402, WB:WBPaper00004403, WB:WBPaper00004651, WB:WBPaper00004769, WB:WBPaper00005654, WB:WBPaper00006395, WB:WBPaper00024497, WB:WBPerson557]
|
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sterile progeny
|
"Any variation that compromises the reproductive ability of the progeny of an animal." [WB:WBPerson2021, WB:WBPerson557]
|
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transgene subcellular localization variant
|
"Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals." [WB:WBPerson557]
|
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Variant
|
"Animals exhibit variations compared to a given control." [WB:WBPerson557]
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