JCGG-STR031107:JCGGDB ID

JCGGDB Glycan Structure Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)

JCGGDB ID JCGG-STR031107

GlyTouCan G56748EO

version 2

Glycan Information

Glyco Tree get Image

Composition

Hex 5 HexNAc 5
Mass Value Search

GlcNAc 5 Man 5
Structural Isomer Search

Descriptors Computed from Structure

InChIKey	OFGVCCPCUPAWDM-HWSLBTGZSA-N
InChI	InChI=1S/C70H117N5O51/c1-16(84)71-31-45(98)54(26(11-81)110-61(31)107)120-65-35(75-20(5)88)46(99)55(27(12-82)116-65)122-69-53(106)59(125-70-60(126-64-34(74-19(4)87)44(97)38(91)23(8-78)113-64)51(104)56(28(13-83)117-70)121-62-32(72-17(2)85)42(95)36(89)21(6-76)111-62)57(123-63-33(73-18(3)86)43(96)37(90)22(7-77)112-63)30(119-69)15-109-67-52(105)58(124-68-50(103)48(101)40(93)25(10-80)115-68)41(94)29(118-67)14-108-66-49(102)47(100)39(92)24(9-79)114-66/h21-70,76-83,89-107H,6-15H2,1-5H3,(H,71,84)(H,72,85)(H,73,86)(H,74,87)(H,75,88)/t21-,22-,23-,24-,25-,26-,27-,28-,29-,30-,31-,32-,33-,34-,35-,36-,37-,38-,39-,40-,41-,42-,43-,44-,45-,46-,47+,48+,49+,50+,51+,52+,53+,54-,55-,56-,57-,58+,59-,60+,61-,62+,63+,64+,65+,66+,67+,68-,69+,70-/m1/s
SMILES	CC(=O)N[C@H]1[C@H](O)O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@@H](O[C@@H]3O[C@H](CO[C@H]4O[C@H](CO[C@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]5O)[C@@H](O)[C@H](O[C@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]5O)[C@@H]4O)[C@@H](O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4NC(C)=O)[C@H](O[C@H]4O[C@H](CO)[C@@H](O[C@@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@H]5NC(C)=O)[C@H](O)[C@@H]4O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4NC(C)=O)[C@@H]3O)[C@H](O)[C@H]2NC(C)=O)[C@@H]1O

Mass

	Monoisotopic Mass	Average Mass
Underivatised Oligosaccharides	1843.6715	1844.7021
Permethylated Oligosaccharides	2292.1724	2293.562
Peracetylated Oligosaccharides	2977.9568	2979.7083

Glycan Motifs

Motif ID	Structure / SubStructure Name	Note
JCGG-MOTIF1003	Bisecting GlcNAc and N-glycan core structure	Reducing Terminal

External Links

GMDB (MSⁿ)

GMDB ONH-00006d ONH-00006d

JCGG	JCGG JGD-000957 JGD-000957

MDHPLCDB (HPLCⁿ)

MDHPLCDB H5.3 H5.3

GlycomeDB (Structure)

GlycomeDB 978 978

KEGG (Structure)

KEGG G10698 G10698

SGCAL (Mass Identification)

SGCAL N-022 N-022

Description: Hybrid-IIB/Man2(GlcNAc2)(GlcNAcb1-4)Man3GlcNAc2

CarbBank

CCSD : 1824

Title : 1H-NMR Spectroscopic Characterization of Dansyl Glyco-asparagines Derived from Hen Egg White Glycoproteins

Authors : van Halbeek H; Vliegenthart JFG; Iwase H; Li SC; Li YT

Info : Glycoconj J (1985) 2: 235-253

TAXID : 9031 Other Data : egg Other Data : 2010-12-17

CCSD : 1825

Title : Study of the structure of the glycan of hen ovotransferrin

Authors : Spik G; Fournet B; Montreuil J

Info : C R Acad Sci (1979) 288: 967-970

TAXID : 9031 Other Data : 2010-12-17

CCSD : 1827

Title : Structures and functions of the sugar chains of cell surface glycoproteins

Authors : Kobata A

Info : Cell Struct Funct (1979) 4: 169-181

Other Data : 2010-12-17

CCSD : 1828

Title : The structures of the galactose-containing sugar chains of ovalbumin

Authors : Yamashita K; Tachibana Y; Kobata A

Info : J Biol Chem (1978) 253: 3862-3869

Other Data : 2010-12-17

CCSD : 7729

Title : Frontal affinity chromatography of ovalbumin glycoasparagines on a concanavalin A-Sepharose column. A quantitative study of the binding specificity of the lectin

Authors : Ohyama Y; Kasai K; Nomoto H; Inoue Y

Info : J Biol Chem (1985) 260: 6882-6887

Other Data : 2010-12-17

CCSD : 7730

Title : New methods for rapid separation and detection of oligosaccharides from glycoproteins

Authors : Chen LM; Yet MG; Shao MC

Info : FASEB J (1988) 2: 2819-2824

Other Data : 2010-12-17

CCSD : 7731

Title : Structural requirements for the binding of oligosaccharides and glycopeptides to immobilized wheat germ agglutinin

Authors : Yamamoto K; Tsuji T; Matsumoto I; Osawa T

Info : Biochemistry (1981) 20: 5894-5899

Other Data : 2010-12-17

CCSD : 9018

Title : Compositional and structural heterogeneity of avidin glycoproteins

Authors : Bruch RC; White HB

Info : Biochemistry (1982) 21: 5334-5341

Other Data : 2010-12-17

CCSD : 15703

Title : New methods for rapid separation and detection of oligosaccharides from glycoproteins

Authors : Chen LM; Yet MG; Shao MC

Info : FASEB J (1988) 2: 2819-2824

Other Data : 2010-12-17

CCSD : 15907

Title : Oligomannoside-type glycopeptides inhibiting adhesion of Escherichia coli strains mediated by type 1 pili: preparation of potent inhibitors from plant glycoproteins

Authors : Neeser JR; Koellreutter B; Wuersch P

Info : Infect Immun (1986) 52: 428-436

Other Data : 2010-12-17

CCSD : 16299

Title : Concanavalin A interactions with asparagine-linked glycopeptides. Bivalency of high mannose and bisected hybrid type glycopeptides

Authors : Bhattacharyya L; Ceccarini C; Lorenzoni P; Brewer CF

Info : J Biol Chem (1987) 262: 1288-1293

Other Data : 2010-12-17

CCSD : 16823

Title : Analytical high-performance affinity chromatography of ovalbumin- derived glycopeptides on columns of concanavalin A- and wheat germ agglutinin-immobilized gels

Authors : Honda S; Suzuki S; Nitta T; Kakehi K

Info : J Chromatogr (1988) 438: 73-84

Other Data : 2010-12-17

CCSD : 25056

Title : Interactions of Bowringia mildbraedii agglutinin with complex- and hybrid-type glycans

Authors : Chawla D; Animashaun T; Hughes RC

Info : FEBS Lett (1992) 298: 291-296

Other Data : 2010-12-17

CCSD : 41474

Title : Preparation of eight ovalbumin subfractions by combined lectin affinity chromatography

Authors : Kato Y; Iwase H; Hotta K

Info : Anal Biochem (1984) 138: 437-441

TAXID : 9031 Other Data : egg Other Data : 2010-12-17

CCSD : 43558

Title : Noncovalent neoglycoproteins

Authors : Shao MC; Sokolik CW; Wold F

Info : Neoglycoconjugates: Preparation and Applications (1994) : 225-249

Other Data : ovalbumin Other Data : 2010-12-17