JCGG-STR027098:JCGGDB ID

JCGGDB Glycan Structure Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)

JCGGDB ID JCGG-STR027098

GlyTouCan G26203DP

version 2

Glycan Information

Glyco Tree get Image

Composition

Hex 3 HexNAc 1 Neu5Ac 5
Mass Value Search

Gal 2 GalNAc 1 Glc 1 Neu5Ac 5
Structural Isomer Search

Descriptors Computed from Structure

InChIKey	YUUOQYGNRQVTKE-XREIPCNMSA-N
InChI	InChI=1S/C81H130N6O61/c1-21(97)82-41-27(103)7-77(72(122)123,142-61(41)47(110)32(108)12-88)139-36(16-92)51(114)63-43(84-23(3)99)29(105)9-79(144-63,74(126)127)141-38(18-94)53(116)65-45(86-25(5)101)31(107)11-81(146-65,76(130)131)148-67-57(120)71(136-58-39(19-95)132-68(121)55(118)54(58)117)135-40(20-96)59(67)137-69-46(87-26(6)102)60(49(112)34(14-90)133-69)138-70-56(119)66(50(113)35(15-91)134-70)147-80(75(128)129)10-30(106)44(85-24(4)100)64(145-80)52(115)37(17-93)140-78(73(124)125)8-28(104)42(83-22(2)98)62(143-78)48(111)33(109)13-89/h27-71,88-96,103-121H,7-20H2,1-6H3,(H,82,97)(H,83,98)(H,84,99)(H,85,100)(H,86,101)(H,87,102)(H,122,123)(H,124,125)(H,126,127)(H,128,129)(H,130,131)/t27-,28-,29-,30-,31-,32+,33+,34+,35+,36+,37+,38+,39+,40+,41+,42+,43+,44+,45+,46+,47+,48+,49-,50-,51+,52+,53+,54+,55+,56+,57+,58+,59-,60+,61+,62+,63+,64+,65+,66-,67+,68+,69-,70-,71-,77+,78+,79+,80-,81-/m0/s
SMILES	CC(=O)N[C@@H]1[C@@H](O)C[C@@](O[C@H](CO)[C@@H](O)[C@@H]2O[C@@](C[C@H](O)[C@H]2NC(C)=O)(O[C@H](CO)[C@@H](O)[C@@H]2O[C@@](C[C@H](O)[C@H]2NC(C)=O)(O[C@@H]2[C@@H](O)[C@H](O[C@@H]3[C@@H](CO)O[C@@H](O)[C@H](O)[C@H]3O)O[C@H](CO)[C@@H]2O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O[C@@]4(C[C@H](O)[C@@H](NC(C)=O)[C@@H](O4)[C@H](O)[C@@H](CO)O[C@@]4(C[C@H](O)[C@@H](NC(C)=O)[C@@H](O4)[C@H](O)[C@H](O)CO)C(O)=O)C(O)=O)[C@H]3O)[C@H]2NC(C)=O)C(O)=O)C(O)=O)(O[C@H]1[C@H](O)[C@H](O)CO)C(O)=O

Mass

	Monoisotopic Mass	Average Mass
Underivatised Oligosaccharides	2162.7253 (A_n=2 ) = 1580.5345+ A[291.0954]_n=2	2163.9269 (A_n=2 ) = 1581.4111+ A[291.2579]_n=2
Permethylated Oligosaccharides	2709.3361 (A_n=2 ) = 1986.9886+ A[361.1737]_n=2	2710.9752 (A_n=2 ) = 1988.1906+ A[361.3923]_n=2
Peracetylated Oligosaccharides	3339.0213 (A_n=2 ) = 2504.7671+ A[417.1271]_n=2	3340.9708 (A_n=2 ) = 2506.2312+ A[417.3698]_n=2

Glycan Motifs

Motif ID	Structure / SubStructure Name	Note
JCGG-MOTIF3003	ganglio	Reducing Terminal
JCGG-MOTIF4082	Poly-N-Acetylneuraminic Acid	NON-Reducing Terminal
JCGG-MOTIF4120	Sia(a2-8)Sia(2-3)Gal / Terminal Disialyl Sequence	NON-Reducing Terminal

External Links

GlycoEpitope (Antiglycan Antibody)

GlycoEpitope GLPD-000025 GLPD-000025

Name:   GP1c
Description:   IV³Neu5Ac₂II³Neu5Ac₃Gg₄Cer
Reducing terminal:   (b-1)Cer

JCGG	JCGG JGD-000571 JGD-000571 Reducing terminal: (b-1)Cer

LipidBank (Spectral Data)

LipidBank GSG1110 GSG1110

Description: NeuAca2-8NeuAca2-3Galb1-3GalNAcb1-4(NeuAca2-8NeuAca2-8NeuAca2-3)Galb1-4GlcCer
Reducing terminal: (b-)Cer

GlycomeDB (Structure)

GlycomeDB 606 606

KEGG (Structure)

KEGG G00122 G00122

CarbBank

CCSD : 6998

Title : Molecular cloning and function analysis of sialyltranferase

Authors : Tsuji S

Info : J Biochem (1996) 120: 1-13

Other Data : 2010-12-17

CCSD : 27845

Title : Further studies on the changes of chicken brain gangliosides during prenatal and postnatal life

Authors : Sonnino S; Bassi R; Chigorno V; Tettamanti G

Info : J Neurochem (1990) 54: 1653-1660

TAXID : 9031 Other Data : brain Other Data : 2010-12-17

CCSD : 29479

Title : The c-series gangliosides GT3, GT2 and GP1c are formed in rat liver Golgi by the same set of glycosyltransferases that catalyse the biosynthesis of asialo-, a- and b-series gangliosides

Authors : Iber H; Zacharias C; Sandhoff K

Info : Glycobiology (1992) 2: 137-142

Other Data : 2010-12-17

CCSD : 33692

Title : Substrate specificity of .alpha.2-3-sialyltransferases in ganglioside biosynthesis of rat liver golgi

Authors : Iber H; van Echten G; Sandhoff K

Info : Eur J Biochem (1991) 195: 115-120

Other Data : 2010-12-17

CCSD : 35401

Title : Activities of five different sialyltransferases in fish and rat brains

Authors : Freischutz B; Saito M; Rahmann H; Yu RK

Info : J Neurochem (1994) 62: 1965-1973

TAXID : 8127 Other Data : brain Other Data : 2010-12-17

CCSD : 35529

Title : Gangliosides and regeneration of the goldfish optic nerve in vivo and in vitro

Authors : Rahmann H; Rosner H; Sonnentag U; Esders S

Info : Neurochem Int (1992) 20: 371-383

TAXID : 7957 Other Data : retina, optic nerve Other Data : 2010-12-17

CCSD : 36136

Title : Gangliosides and modulation of the function of neural cells

Authors : Tettamanti G; Riboni L

Info : Adv Lipid Res (1993) 25: 235-267

Other Data : brain Other Data : 2010-12-17

CCSD : 37234

Title : Designation and schematic structure of gangliosides and allied glycosphingolipids

Authors : Svennerholm L

Info : Prog Brain Res (1994) 101: 11-14

Other Data : 2010-12-17

CCSD : 41135

Title : Improved thin-layer chromatographic separation of gangliosides by automated multiple development

Authors : Muthing J

Info : J Chromatogr B Biomed Sci App (1994) 657: 75-81

TAXID : 9031 Other Data : brain Other Data : 2010-12-17

CCSD : 42148

Title : Brain gangliosides and memory formation

Authors : Rahmann H

Info : Behav Brain Res (1995) 66: 105-116

TAXID : 10116 Other Data : brain Other Data : 2010-12-17

CCSD : 44056

Title : Ganglioside metabolism- topology and regulation

Authors : Sandhoff K; van Echten G

Info : Adv Lipid Res (1993) 26: 119-142

Other Data : 2010-12-17

CCSD : 44835

Title : The chemical constitution of gangliosides of the vertebrate nervous system

Authors : Wiegandt H

Info : Behav Brain Res (1995) 66: 85-97

Other Data : brain Other Data : 2010-12-17

CCSD : 50228

Title : Development regulation of ganglioside metabolism

Authors : Yu RK

Info : Prog Brain Res (1994) 101: 31-44

Other Data : 2010-12-17