JCGG-STR024687:JCGGDB ID

JCGGDB Glycan Structure Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)

Glycan Information

Glyco Tree get Image

Composition

Hex 4 HexNAc 1 dHex 1
Mass Value Search

Fuc 1 Gal 3 GalNAc 1 Glc 1
Structural Isomer Search

Descriptors Computed from Structure

InChIKey	LKMSNDGCRNQHOM-MMCXSDQJSA-N
InChI	InChI=1S/C38H65NO30/c1-8-16(46)20(50)25(55)35(59-8)69-32-31(68-36-26(56)21(51)17(47)10(3-40)62-36)19(49)12(5-42)63-38(32)67-30-15(39-9(2)45)34(61-11(4-41)18(30)48)65-29-14(7-44)64-37(27(57)23(29)53)66-28-13(6-43)60-33(58)24(54)22(28)52/h8,10-38,40-44,46-58H,3-7H2,1-2H3,(H,39,45)/t8-,10+,11+,12+,13+,14+,15+,16+,17-,18-,19-,20+,21-,22+,23+,24+,25-,26+,27+,28+,29-,30+,31-,32+,33+,34-,35-,36+,37-,38-/m0/s
SMILES	C[C@@H]1O[C@@H](O[C@H]2[C@H](O[C@H]3[C@@H](O)[C@@H](CO)O[C@@H](O[C@@H]4[C@H](O)[C@@H](O)[C@H](O[C@H]5[C@H](O)[C@@H](O)[C@H](O)O[C@@H]5CO)O[C@@H]4CO)[C@@H]3NC(C)=O)O[C@H](CO)[C@H](O)[C@@H]2O[C@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2O)[C@@H](O)[C@H](O)[C@@H]1O

Mass

	Monoisotopic Mass	Average Mass
Underivatised Oligosaccharides	1015.359	1015.9228
Permethylated Oligosaccharides	1281.6566	1282.4333
Peracetylated Oligosaccharides	1771.5492	1772.5938

Glycan Motifs

Motif ID	Structure / SubStructure Name	Note
JCGG-MOTIF3003	ganglio	Reducing Terminal

External Links

JCGG	JCGG JGD-000350 JGD-000350 Reducing terminal: (b-1)Cer

LipidBank (Spectral Data)

LipidBank GSG1365 GSG1365

Description: Gala1-3(Fuca1-2)Galb1-3GalNAcb1-4Galb1-4GlcCer
Reducing terminal: (b-)Cer

GlycomeDB (Structure)

GlycomeDB 3785 3785

KEGG (Structure)

KEGG G00988 G00988

CarbBank

CCSD : 1093

Title : A new type of blood-group B active glycosphingolipid in rat bone marrow cells. Occurrence of the glycolipid in rat immunocytes and ascites hepatoma

Authors : Taki T; Kimura H; Gasa S; Nakamura M; Matsumoto M

Info : J Biol Chem (1985) 260: 6219-6225

TAXID : 10116 Other Data : bone marrow Other Data : 2010-12-17

CCSD : 1094

Title : Characterization of neutral blood-group B-active glycosphingolipids of rat gastric mucosa

Authors : Hansson GC; Bouhours JF; Angstrom J

Info : J Biol Chem (1987) 262: 13135-13141

TAXID : 10116 Other Data : gastric mucosa Other Data : 2010-12-17

CCSD : 15397

Title : Asialogangliosides as differentiation markers of rat erythropoietic and granulopoietic cells in rat bone marrow. Flow cytometric analysis of rat bone marrow cells using anti-asialoganglioside antibodies

Authors : Kimura H; Taki T; Hoshi S; Yamamoto S; Matsumoto M

Info : Cell Struct Funct (1986) 11: 89-97

Other Data : 2010-12-17

CCSD : 21469

Title : Identification of .alpha.-galactose (.alpha.-fucose)-asialo-GM1 glycolipid expressed by subsets of rat dorsal root ganglion neurons

Authors : Chou DKH; Dodd J; Jessell TM; Costello CE; Jungalwala FB

Info : J Biol Chem (1989) 264: 3409-3415

TAXID : 10116 Other Data : dorsal root ganglion neuron Other Data : 2010-12-17

CCSD : 32751

Title : Human blood group B-active ganglio-glycosphingolipid in rat glioma

Authors : Suetake K; Gasa S; Taki T; Chiba M; Yamaki T; Ibayashi Y; Hashi K

Info : Biochim Biophys Acta (1993) 1170: 25-31

TAXID : 10116 Other Data : 2010-12-17

CCSD : 45297

Title : Accumulation of isogloboside and ganglio-N-tetraosyl ceramide having blood group B determinant in the hepatomas of female LEC rats

Authors : Ariga T; Kasai N; Miyoshi I; Yamawaki M; Scarsdale JN; Yu RK; Kasama T; Taki T

Info : Biochim Biophys Acta (1995) 1254: 257-266

TAXID : 10116 Other Data : hepatoma, liver Other Data : 2010-12-17

JCGGDB ID JCGG-STR024687

Glycan Information

External Links