JCGG-STR015825:JCGGDB ID

JCGGDB Glycan Structure Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)

Glycan Information

Glyco Tree get Image

Composition

Hex 3 HexNAc 5 dHex 1
Mass Value Search

Fuc 1 GlcNAc 5 Man 3
Structural Isomer Search

Descriptors Computed from Structure

InChIKey	FCQASDHZFMSUBM-VAADDPKZSA-N
InChI	InChI=1S/C64H107N5O45/c1-15-34(80)46(92)49(95)61(101-15)99-14-28-52(44(90)29(56(97)102-28)65-16(2)75)110-60-33(69-20(6)79)45(91)51(25(11-74)107-60)111-62-50(96)53(112-64-55(47(93)38(84)24(10-73)106-64)114-59-32(68-19(5)78)43(89)37(83)23(9-72)105-59)40(86)27(108-62)13-100-63-54(113-58-31(67-18(4)77)42(88)36(82)22(8-71)104-58)48(94)39(85)26(109-63)12-98-57-30(66-17(3)76)41(87)35(81)21(7-70)103-57/h15,21-64,70-74,80-97H,7-14H2,1-6H3,(H,65,75)(H,66,76)(H,67,77)(H,68,78)(H,69,79)/t15-,21+,22+,23+,24+,25+,26+,27+,28+,29+,30+,31+,32+,33+,34+,35+,36+,37+,38+,39+,40+,41+,42+,43+,44+,45+,46+,47-,48-,49-,50-,51+,52+,53-,54-,55-,56+,57+,58-,59-,60-,61+,62-,63-,64+/m0/s
SMILES	C[C@@H]1O[C@@H](OC[C@H]2O[C@@H](O)[C@H](NC(C)=O)[C@@H](O)[C@@H]2O[C@@H]2O[C@H](CO)[C@@H](O[C@@H]3O[C@H](CO[C@H]4O[C@H](CO[C@@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@H]5NC(C)=O)[C@@H](O)[C@H](O)[C@@H]4O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4NC(C)=O)[C@@H](O)[C@H](O[C@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]4O[C@@H]4O[C@H](CO)[C@@H](O)[C@H](O)[C@H]4NC(C)=O)[C@@H]3O)[C@H](O)[C@H]2NC(C)=O)[C@@H](O)[C@H](O)[C@@H]1O

Mass

	Monoisotopic Mass	Average Mass
Underivatised Oligosaccharides	1665.6238	1666.5604
Permethylated Oligosaccharides	2058.062	2059.3127
Peracetylated Oligosaccharides	2631.8667	2633.4175

Glycan Motifs

Motif ID	Structure / SubStructure Name	Note
JCGG-MOTIF1002	α1,6-fucosylated N-glycan core structure	Reducing Terminal

External Links

GlycomeDB (Structure)

GlycomeDB 2472 2472

KEGG (Structure)

KEGG G10831 G10831

CarbBank

CCSD : 7817

Title : Rous sarcoma virus-transformed baby hamster kidney cells express higher levels of asparagine-linked tri- and tetraantennary glycopeptides containing [GlcNAc-.beta.(1,6)Man-.alpha.(1,6)Man] and poly-N-acetyllactosamine sequences than baby hamster kidney cells

Authors : Pierce M; Arango J

Info : J Biol Chem (1986) 261: 10772-10777

Other Data : BHK cells Other Data : 2010-12-17

CCSD : 12346

Title : Comparison and partial characterization of guinea pig Ia .alpha.-and .beta.- chain oligosaccharides

Authors : Quill H; Schwartz BD

Info : J Immunol (1984) 132: 289-296

TAXID : 10141 Other Data : 2010-12-17

CCSD : 18932

Title : Increased UDP-G1cNAc:.alpha.-mannoside .beta.(1-4) N- acetylglucosaminyltransferase activity during chick embryo development

Authors : Ogier-Denis E; Bauvy C; Moutsita R; Aubery M; Codogno P

Info : Biochim Biophys Acta (1990) 1054: 149-153

Other Data : 2010-12-17

CCSD : 35049

Title : A mouse lymphoma cell line resistant to the leukoagglutinating lectin from Phaseolus vulgaris is deficient in UDP-GlcNAc:.alpha.-D-mannoside .beta.1,6 N- acetylglucosaminyltransferase

Authors : Cummings RD; Trowbridge IS; Kornfeld S

Info : J Biol Chem (1982) 257: 13421-13427

Other Data : 2010-12-17

CCSD : 36234

Title : Interaction of Trypanosoma cruzi with cells with altered glycosylation patterns

Authors : Do Carmo Ciavaglia M; De Carvalho TU; De Souza W

Info : Biochem Biophys Res Commun (1993) 193: 718-721

TAXID : 10029 Other Data : CHO cells Other Data : 2010-12-17

JCGGDB ID JCGG-STR015825

Glycan Information

External Links