JCGG-STR011760:JCGGDB ID

JCGGDB Glycan Structure Research Center for Medical Glycoscience, National Institute of Advanced Industrial Science and Technology (AIST)

Glycan Information

Glyco Tree get Image

Composition

Hex 5 HexNAc 2
Mass Value Search

Gal 4 Glc 1 GlcNAc 2
Structural Isomer Search

Descriptors Computed from Structure

InChIKey	LTGQWPQKDGBKLP-VFWBZDSBSA-N
InChI	InChI=1S/C46H78N2O36/c1-10(56)47-19-25(62)34(17(8-54)77-42(19)83-38-23(60)14(5-51)76-46(32(38)69)81-36-16(7-53)72-40(71)29(66)28(36)65)79-44-31(68)37(22(59)13(4-50)74-44)82-41-20(48-11(2)57)26(63)35(18(9-55)78-41)80-45-33(70)39(24(61)15(6-52)75-45)84-43-30(67)27(64)21(58)12(3-49)73-43/h12-46,49-55,58-71H,3-9H2,1-2H3,(H,47,56)(H,48,57)/t12-,13-,14-,15-,16-,17-,18-,19-,20-,21+,22+,23+,24+,25-,26-,27+,28-,29-,30-,31-,32-,33-,34-,35-,36-,37+,38+,39+,40-,41+,42+,43-,44+,45+,46+/m1/s
SMILES	CC(=O)N[C@@H]1[C@@H](O)[C@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O[C@H]3O[C@H](CO)[C@H](O)[C@H](O)[C@H]3O)[C@H]2O)[C@@H](CO)O[C@H]1O[C@H]1[C@@H](O)[C@@H](CO)O[C@@H](O[C@H]2[C@H](O)[C@@H](NC(C)=O)[C@H](O[C@H]3[C@@H](O)[C@@H](CO)O[C@@H](O[C@H]4[C@H](O)[C@@H](O)[C@H](O)O[C@@H]4CO)[C@@H]3O)O[C@@H]2CO)[C@@H]1O

Mass

	Monoisotopic Mass	Average Mass
Underivatised Oligosaccharides	1234.4333 (A_n=2 ) = 504.1689+ A[365.1322]_n=2	1235.1172 (A_n=2 ) = 504.4424+ A[365.3374]_n=2
Permethylated Oligosaccharides	1556.7935 (A_n=2 ) = 658.3413+ A[449.2261]_n=2	1557.7352 (A_n=2 ) = 658.738+ A[449.4986]_n=2
Peracetylated Oligosaccharides	2116.655 (A_n=2 ) = 966.2852+ A[575.1849]_n=2	2117.8998 (A_n=2 ) = 966.8524+ A[575.5237]_n=2

Glycan Motifs

Motif ID	Structure / SubStructure Name	Note
JCGG-MOTIF3009	neolacto	Reducing Terminal
JCGG-MOTIF4062	Paragloboside	Reducing Terminal
JCGG-MOTIF4099	Alpha-Galactosyl Epitope	NON-Reducing Terminal

ID History Deleted Version

JCGG-STR032161(2)

External Links

GlycoEpitope (Antiglycan Antibody)

GlycoEpitope GLPD-000090 GLPD-000090

Name:   VI³aGalnLc₆Cer
Description:   VI³aGalnLc₆Cer
Reducing terminal:   (b-1)Cer

JCGG	JCGG JGD-000596 JGD-000596 Reducing terminal: (b-1)Cer

LipidBank (Spectral Data)

LipidBank GSG1177 GSG1177

Description: Gala1-3Galb1-4GlcNAcb1-3Galb1-4GlcNAcb1-3Galb1-4GlcCer
Reducing terminal: (b-)Cer

GlycomeDB (Structure)

GlycomeDB 2091 2091

KEGG (Structure)

KEGG G00678 G00678

CarbBank

CCSD : 1263

Title : Immunochemistry of I/i-active oligo- and polyglycosylceramides from rabbit erythrocyte membranes

Authors : Egge H; Kordowicz M; Peter-Katalinic J; Hanfland P

Info : J Biol Chem (1985) 260: 4927-4935

TAXID : 9986 Other Data : erythrocyte Other Data : 2010-12-17

CCSD : 11956

Title : Immunochemistry of I/i-active oligo- and polyglycosylceramides from rabbit erythrocyte membranes. II. Determination of branching patterns of a ceramide pentadecasaccharide by proton nuclear magnetic resonance

Authors : Dabrowski U; Hanfland P; Egge H; Kuhn S; Dabrowski J

Info : J Biol Chem (1984) 259: 7648-7651

TAXID : 9986 Other Data : erythrocyte Other Data : 2010-12-17

CCSD : 16368

Title : Identification of erythrocyte Gal.alpha.1-3Gal glycosphingolipids with a mouse monoclonal antibody, Gal-13

Authors : Galili U; Basbaum CB; Shohet SB; Buehler J; Macher BA

Info : J Biol Chem (1987) 262: 4683-4688

Other Data : 2010-12-17

CCSD : 16865

Title : The human natural anti-Gal IgG. III. The subtlety of immune tolerance in man as demonstrated by crossreactivity between natural anti-Gal and anti-B antibodies

Authors : Galili U; Buehler J; Shohet SB; Macher BA

Info : J Exp Med (1987) 165: 693-704

TAXID : 9913 Other Data : 2010-12-17

CCSD : 17652

Title : Characterization of a polyclonal anti-Gal-.alpha.1-3Gal antibody from chicken

Authors : Bouhours JF; Richard C; Ruvoen N; Barreau N; Naulet J; Bouhours D

Info : Glycoconj J (1998) 15: 93-99

TAXID : 9986 Other Data : red blood cells Other Data : 2010-12-17

CCSD : 21620

Title : Regulation of the expression of Gal.alpha.1-3Gal.beta.1-4GlcNAc glycosphingolipids in kidney

Authors : Hendricks SP; He P; Stults CLM; Macher BA

Info : J Biol Chem (1990) 265: 17621-17626

Other Data : kidney Other Data : 2010-12-17

CCSD : 23854

Title : Toxin A from Clostridium difficile binds to rabbit erythrocyte glycolipids with terminal Gal.alpha.1-3Gal.beta.1-4GlcNAc sequences

Authors : Clark GF; Krivan HC; Wilkins TD; Smith DF

Info : Arch Biochem Biophys (1987) 257: 217-229

Other Data : 2010-12-17

CCSD : 37845

Title : Studies of the binding specificity of the soluble 14000-dalton bovine heart muscle lectin using immobilised glycolipids and neoglycolipids

Authors : Solomon JC; Stoll MS; Penfold P; Abbott WM; Childs RA; Hanfland P; Feizi T

Info : Carbohydr Res (1991) 213: 293-307

Other Data : 2010-12-17

CCSD : 38038

Title : Characterization of the specificity of binding of Moluccella laevis lectin to glycosphingolipids

Authors : Teneberg S; Leonardsson I; Angstrom J; Ehrlich-Rogozinski S; Sharon N

Info : Glycoconj J (1994) 11: 418-423

TAXID : 9986 Other Data : erythrocyte Other Data : 2010-12-17

CCSD : 44615

Title : Glycosphingolipids of rabbit, sheep, and pig thymus

Authors : He P; Hu J; Macher BA

Info : Arch Biochem Biophys (1993) 305: 350-361

TAXID : 9940 Other Data : thymus Other Data : 2010-12-17

CCSD : 50335

Title : Evolution and pathophysiology of the human natural anti-.alpha.-galactosyl IgG (anti-Gal) antibody

Authors : Galili U

Info : Springer Semin Immunopathol (1993) 15: 155-171

TAXID : 9913 Other Data : 2010-12-17

JCGGDB ID JCGG-STR011760

Glycan Information

External Links