JCGGDB ID JCGG-STR004355

version 2

Glycan Information

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Composition

Descriptors Computed from Structure

Mass

Glycan Motifs

Motif ID	SubStructure Name	Position
JCGG-MOTIF4041	N-Acetyl GM2	Reducing Terminal,NON-Reducing Terminal
JCGG-MOTIF4121	GalNAc(b1-4)[Neu5Ac(a2-3)]Gal(b1)	NON-Reducing Terminal

Chemical Synthesis

External Links

JCGG	JCGG JGD-000578 JGD-000578 Reducing terminal: (b1-1)Cer

LipidBank (Spectral Data)

GSG1090

Description: GalNAcb1-4(NeuAca2-3)Galb1-4GlcCer
Reducing terminal: (b1-)Cer

GSG3014

Description: N-acetyl-galactosaminylb1-4(N-acetylneraminyla2-3)galactosylb1-4glucosylceramide
Reducing terminal: (b1-)Cer

GlycomeDB (Structure)

140

KEGG (Structure)

G00109

G10351

GlycoEpitope (Antiglycan Antibody)

GLPD-000042

Name:  N-acetyl GM2
Description:  II³Neu5AcGg₃Cer
Reducing terminal:   (b1-1)Cer

Epitope

Epitope id	Name
EP0301 EP0301	Neu5Ac(a2-3)Gal Monosialoganglioside
EP0311 EP0311	GalNAc(b1-4)[Neu5Ac(a2-3)]Gal(b1)
EP0051 EP0051	N-Acetyl GM2

LfDB(LECTIN)

Glycan Number: 708

Chitin-binding	SBA LPK-00001d SBA SBL LPK-00001d SBL
Legume	WFA LPL-000026 WFA VVA LPL-000025 VVA VVL LPL-000025 VVL DBA LPL-00000c DBA DBL LPL-00000c DBL

PACDB(Pathogen adhesion)

Pathogen:	Escherichia coli (Enterotoxigenic(ETEC); K88)
Glycan Name:	GM2 [Not Binding]

Pathogen:	Moraxella catarrhalis
Glycan Name:	GM2 [Binding]

Pathogen:	Clostridium perfringens
Glycan Name:	GM2 [Binding]

Pathogen:	Escherichia coli
Glycan Name:	GM2 [Binding]

Pathogen:	Escherichia coli (Uropathogenic(UPEC); K12/HB101(pPIL110-54))
Glycan Name:	GM2 [Not Binding]

Pathogen:	Legionella pneumophila (CORBY)
Glycan Name:	GM2 [Not Binding]

Pathogen:	Clostridium botulinum
Glycan Name:	GM2 [Binding]

Pathogen:	Clostridium perfringens
Glycan Name:	GM2 [Binding]

Pathogen:	Clostridium tetani
Glycan Name:	GM2 [Binding]

Pathogen:	Rotavirus (SA11/NCDV/UK)
Glycan Name:	GM2 [Binding]

Pathogen:	Escherichia coli
Glycan Name:	GM2 [Binding]

Pathogen:	Clostridium tetani
Glycan Name:	GM2 [Not Binding]

Pathogen:	Escherichia coli (Enterotoxigenic(ETEC); E1392-75/58R61/E19446)
Glycan Name:	GM2 [Binding]

Pathogen:	Influenza virus (A/PR/8/34; H1N1; human)
Glycan Name:	GM2 [Not Binding]

Pathogen:	Influenza virus (B/Lee/40; human)
Glycan Name:	GM2 [Not Binding]

Pathogen:	Influenza virus (C/Ann Arbor/1/50; human)
Glycan Name:	GM2 [Not Binding]

Pathogen:	Mycoplasma pneumoniae (M129; virulent)
Glycan Name:	GM2 [Not Binding]

Pathogen:	Escherichia coli (HB101(pCP3727))
Glycan Name:	GM2 [Binding]

Pathogen:	Escherichia coli (HE22(pTD2))
Glycan Name:	GM2 [Binding]

Pathogen:	Vibrio cholerae
Glycan Name:	GM2 [Binding]

Pathogen:	Yersinia pestis (pH6 antigen from Escherichia coli(HB101))
Glycan Name:	GM2 [Not Binding]

Pathogen:	Escherichia coli (HB101(pDG1))
Glycan Name:	GM2 [Not Binding]

Pathogen:	Rotavirus (Neuraminidase-sensitive; simian:SA11(P2/G3) / bovine:NCDV(P1/G6))
Glycan Name:	GM2 [Binding]

Pathogen:	Helicobacter pylori (1139/17874/17875/11637/11638)
Glycan Name:	GM2 [Not Binding]

Pathogen:	Escherichia coli
Glycan Name:	GM2 [Binding]

Pathogen:	Lactobacillus casei (IFO 3425)
Glycan Name:	GM2 [Not Binding]

Pathogen:	Clostridium perfringens (CW8)
Glycan Name:	GM2 [Binding]

Pathogen:	Influenza virus (C; Johannesburg/1/66)
Glycan Name:	GM2 [Not Binding]