| Name | Definition | IS_A | Relationship | External link |
|---|---|---|---|---|
| AB | "Embryonic founder cell" [ISBN:0-87969-307-X] |
WBbt:0008447:somatic blastomere |
||
| AFD | "Neuron class of two ciliated neurons that are part of the amphid sensillum; the endings of AFD have numerous villi, which poke into the amphid sheath cells." [WB:Paper00000938] |
amphid neuron
:amphid neuron WBbt:0005838:thermosensory neuron WBbt:0008430:carbon dioxide sensory neuron |
||
| ALA | "Neuron class of one neuron, sends processes laterally and along dorsal cord." [ISBN:0-87969-307-X] |
neuron
:neuron head neuron :head neuron WBbt:0007028:embryonic cell |
part_of
WBbt:0005214:dorsal ganglion |
WormAtlas |
| ALM | "Neuron class of two anterior sensory neurons that transduce touch stimuli." [WB:Paper00000938] |
WBbt:0005237:touch receptor neuron |
||
| AMshL | "Embryonic cell of pedigree ABplaapaapp, amphid sheath cell, left." [ISBN:0-87969-307-X] |
WBbt:0006754:amphid sheath cell WBbt:0007028:embryonic cell |
part_of
WBbt:0005395:amphid left sensillum |
WormAtlas |
| AMshR | "Embryonic cell of pedigree ABpraapaapp, amphid sheath cell, right." [ISBN:0-87969-307-X] |
WBbt:0006754:amphid sheath cell WBbt:0007028:embryonic cell |
part_of
WBbt:0005392:amphid right sensillum |
WormAtlas |
| ASGL | "one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil" [ISBN:0-87969-307-X] |
WBbt:0005102:lateral ganglion left neuron WBbt:0005664:ASG head neuron :head neuron WBbt:0007028:embryonic cell |
part_of
WBbt:0005395:amphid left sensillum |
WormAtlas |
| ASGR | "one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil" [ISBN:0-87969-307-X] |
WBbt:0005100:lateral ganglion right neuron WBbt:0005664:ASG head neuron :head neuron WBbt:0007028:embryonic cell |
part_of
WBbt:0005392:amphid right sensillum |
WormAtlas |
| AVA | "Neuron class of two interneurons with cell bodies situated in the lateral ganglia adjacent to the neuropile of the nerve ring." [WB:Paper00000938] |
WBbt:0007804:command interneuron |
||
| AVE | "Neuron class of two interneurons with cell bodies situated in the lateral ganglion close to the ring neuropile." [WB:Paper00000938] |
WBbt:0007804:command interneuron |
||
| AWB | "Neuron class of two ciliated neurons with flattened, sheet-like endings that are associated with the sheath cells of the amphid sensilla" [WB:Paper00000938] |
amphid neuron
:amphid neuron WBbt:0005839:odorsensory neuron |
||
| B cell | "Rectal cell, postembryonic blast cell in male" [ISBN:0-87969-307-X] |
WBbt:0006783:blast cell WBbt:0008182:rectal epithelial cell |
WormAtlas | |
| BAG | "Neuron class of two neurons with ciliated endings, in the head, with elliptical, closed, sheet-like processes near the cilium, which envelop a piece of hypodermis." [WB:Paper00000938] |
WBbt:0006816:ciliated neuron WBbt:0008430:carbon dioxide sensory neuron WBbt:0008432:oxygen sensory neuron |
||
| Cell | "a cellular object that consists of subcellular components, expresses genes or functions." [WB:rynl] |
WBbt:0000100:C. elegans Cell and Anatomy |
||
| DA neuron | "Neuron class of nine ventral cord motor neuron, innervates dorsal muscle." [WB:rynl] |
WBbt:0005409:motor neuron WBbt:0006840:cholinergic neuron |
||
| DD neuron | "Neuron class of six motoneurons, with cell bodies in the ventral cord, which innervate dorsal muscles. Each cell has a short, posteriorly directed and a longer, anteriorly directed process emanating from its cell body. The anterior process has a branch, which leaves the ventral cord as a commissure and runs round to the dorsal cord." [WB:Paper00000938] |
GABAergic neuron
:GABAergic neuron WBbt:0005409:motor neuron |
||
| DTC | "somatic cell that situates at the tip of a gonad arm." [WB:rynl] |
Cell
:Cell |
part_of
WBbt:0005175:gonad |
WormAtlas |
| EMS | "embryonic cell" [WB:rynl] |
WBbt:0008447:somatic blastomere |
||
| F cell | "Rectal cell, blast cell in male" [ISBN:0-87969-307-X] |
rectal epithelium
:rectal epithelium WBbt:0006783:blast cell WBbt:0008182:rectal epithelial cell |
WormAtlas | |
| FLP | "Neuron class of two neurons, which have ciliated endings situated immediately dorsal to the lateral inner labial sensilla in the head but have no associated sheath or socket cells; they have flattened processes in this region of the cilium." [WB:Paper00000938] |
WBbt:0006816:ciliated neuron WBbt:0008431:mechanosensory neuron |
||
| GABAergic neuron | "neuron that uses GABA as a vesicular neurotransmitter." [WB:rynl] |
neuron
:neuron |
||
| GLRL | "Set of six cells that form a thin cylindrical sheet between pharynx and ring neuropile; no chemical synapses, but gap junctions with muscle arms and RME motor neurons" [ISBN:0-87969-307-X] |
WBbt:0005176:GLR |
WormAtlas | |
| GLRR | "Set of six cells that form a thin cylindrical sheet between pharynx and ring neuropile; no chemical synapses, but gap junctions with muscle arms and RME motor neurons" [ISBN:0-87969-307-X] |
WBbt:0005176:GLR |
WormAtlas | |
| I5 neuron | "Neuron class of one pharyngeal interneuron, posterior sensory." [ISBN:0-87969-307-X] |
WBbt:0003668:pharyngeal interneuron WBbt:0005113:interneuron |
part_of
terminal bulb
:terminal bulb |
|
| K cell | "Rectal cell, postembryonic blast cell" [ISBN:0-87969-307-X] |
WBbt:0006783:blast cell WBbt:0008182:rectal epithelial cell |
WormAtlas | |
| NSML | "Pharyngeal neurosecretory motorneuron, contain serotonin" [ISBN:0-87969-307-X] |
WBbt:0003666:NSM |
WormAtlas | |
| NSMR | "Pharyngeal neurosecretory motorneuron, contain serotonin" [ISBN:0-87969-307-X] |
WBbt:0003666:NSM |
WormAtlas | |
| OLL | "Neuron class of two neurons with ciliated endings in the lateral outer labial sensilla." [WB:Paper00000938] |
WBbt:0006801:outer labial neuron |
||
| P6.pa | "cell, anterior daughter of P6.p" [WB:rynl] |
WBbt:0007030:post-embryonic cell |
||
| P6.paa | "cell, anterior daughter of P6.pa" [WB:rynl] |
WBbt:0007030:post-embryonic cell |
||
| P6.pap | "cell, posterior daughter of P6.pa" [WB:rynl] |
WBbt:0007030:post-embryonic cell |
||
| P6.pp | "cell, posteior daughter of P6.p" [WB:rynl] |
WBbt:0007030:post-embryonic cell |
||
| P6.ppa | "cell, anterior daughter of P6.pp" [WB:rynl] |
WBbt:0007030:post-embryonic cell |
||
| P6.ppp | "post-embryonic cell of pedigree P6.ppp" [WB:rynl] |
WBbt:0007030:post-embryonic cell |
||
| PDA | "Neuron class of one motor neuron, process in dorsal cord, same as Y cell in hermaphrodite, Y.a in male." [ISBN:0-87969-307-X] |
WBbt:0005409:motor neuron preanal ganglion neuron :preanal ganglion neuron |
WormAtlas | |
| PHAL | "Phasmid neurons, probably chemosensory" [ISBN:0-87969-307-X] |
WBbt:0005097:lumbar left ganglion neuron WBbt:0007807:PHA |
part_of
WBbt:0005431:phasmid left sensillum |
WormAtlas |
| PHAR | "Phasmid neurons, probably chemosensory" [ISBN:0-87969-307-X] |
WBbt:0005600:lumbar right ganglion neuron WBbt:0007807:PHA |
part_of
WBbt:0005427:phasmid right sensillum |
WormAtlas |
| PHBL | "Phasmid neurons, probably chemosensory" [ISBN:0-87969-307-X] |
WBbt:0005097:lumbar left ganglion neuron WBbt:0007808:PHB |
part_of
WBbt:0005431:phasmid left sensillum |
WormAtlas |
| PHBR | "Phasmid neuron, probably chemosensory" [ISBN:0-87969-307-X] |
WBbt:0005600:lumbar right ganglion neuron WBbt:0007808:PHB |
part_of
WBbt:0005427:phasmid right sensillum |
WormAtlas |
| PLM | "Neuron class of two posterior sensory neurons that transduce touch stimuli." [WB:Paper00000938] |
WBbt:0005237:touch receptor neuron |
||
| PVD | "Neuron class of two interneurons with cell bodies situated laterally in the posterior body." [WB:Paper00000938] |
WBbt:0005113:interneuron WBbt:0008431:mechanosensory neuron |
||
| Psub1 | "embryonic founder cell" [WB:rynl] |
WBbt:0008448:germline blastomere |
||
| R2AL | "Post-embryonic cell of pedigree V6L.papapaaa, male sensory rays, neuron, striated rootlet." [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008392:R2A |
part_of
WBbt:0006946:ray 2 left |
WormAtlas |
| R2AR | "Post-embryonic cell of pedigree V6R.papapaaa, male sensory rays, neuron, striated rootlet." [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008392:R2A |
part_of
WBbt:0006947:ray 2 right |
WormAtlas |
| R2BL | "Post-embryonic cell of pedigree V6L.papapapa, male sensory rays, neuron, darkly staining tip, open to outside." [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008398:R2B |
part_of
WBbt:0006946:ray 2 left |
WormAtlas |
| R2BR | "Post-embryonic cell of pedigree V6R.papapapa, male sensory rays, neuron, darkly staining tip, open to outside." [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008398:R2B |
part_of
WBbt:0006947:ray 2 right |
WormAtlas |
| R3AL | "Post-embryonic cell of pedigree V6L.papppaaa, male sensory rays, neuron, striated rootlet." [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008393:R3A |
part_of
WBbt:0006955:ray 3 left |
WormAtlas |
| R3AR | "Post-embryonic cell of pedigree V6R.papppaaa, male sensory rays, neuron, striated rootlet." [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008393:R3A |
part_of
WBbt:0006956:ray 3 right |
WormAtlas |
| R3BL | "Post-embryonic cell of pedigree V6L.papppapa, male sensory rays, neuron, darkly staining tip, open to outside." [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008399:R3B |
part_of
WBbt:0006955:ray 3 left |
WormAtlas |
| R3BR | "Post-embryonic cell of pedigree V6R.papppapa, male sensory rays, neuron, darkly staining tip, open to outside." [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008399:R3B |
part_of
WBbt:0006956:ray 3 right |
WormAtlas |
| R5AL | "Post-embryonic cell of pedigree V6L.ppppaaaa, male sensory rays, neuron, striated rootlet." [ISBN:0-87969-307-X, WB:Paper00000462] |
WBbt:0006856:R5A WBbt:0007030:post-embryonic cell |
part_of
WBbt:0006959:ray 5 left |
WormAtlas |
| R5AR | "Post-embryonic cell of pedigree V6R.ppppaaaa, male sensory rays, neuron, striated rootlet." [ISBN:0-87969-307-X, WB:Paper00000462] |
WBbt:0006856:R5A WBbt:0007030:post-embryonic cell |
part_of
WBbt:0006960:ray 5 right |
WormAtlas |
| R5BL | "Post-embryonic cell of pedigree V6L.ppppaapa, male sensory rays, neuron, darkly staining tip, open to outside." [ISBN:0-87969-307-X, WB:Paper00000462] |
WBbt:0007030:post-embryonic cell WBbt:0008401:R5B |
part_of
WBbt:0006959:ray 5 left |
WormAtlas |
| R5BR | "Post-embryonic cell of pedigree V6R.ppppaapa, male sensory rays, neuron, darkly staining tip, open to outside." [ISBN:0-87969-307-X, WB:Paper00000462] |
WBbt:0007030:post-embryonic cell WBbt:0008401:R5B |
part_of
WBbt:0006960:ray 5 right |
WormAtlas |
| R6AL | "Post-embryonic cell of pedigree V6L.pppppaaa, male sensory rays, neuron, striated rootlet." [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008395:R6A |
part_of
WBbt:0006961:ray 6 left |
WormAtlas |
| R6AR | "Post-embryonic cell of pedigree V6R.pppppaaa, male sensory rays, neuron, striated rootlet." [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008395:R6A |
part_of
WBbt:0006962:ray 6 right |
WormAtlas |
| R6BL | "Post-embryonic cell of pedigree V6L.pppppapa, male sensory rays, neuron, not darkly staining nor open to outside." [ISBN:0-87969-307-X, WB:Paper00000462] |
WBbt:0007030:post-embryonic cell WBbt:0008402:R6B |
part_of
WBbt:0006961:ray 6 left |
WormAtlas |
| R6BR | "Post-embryonic cell of pedigree V6R.pppppapa, male sensory rays, neuron, not darkly staining nor open to outside." [ISBN:0-87969-307-X, WB:Paper00000462] |
WBbt:0007030:post-embryonic cell WBbt:0008402:R6B |
part_of
WBbt:0006962:ray 6 right |
WormAtlas |
| R8AL | "Post-embryonic cell of pedigree TL.appaaaaa, male sensory rays, neuron, striated rootlet." [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008396:R8A |
part_of
WBbt:0006965:ray 8 left |
WormAtlas |
| R8AR | "Male sensory rays, neuron, striated rootlet" [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008396:R8A |
part_of
WBbt:0006966:ray 8 right |
WormAtlas |
| R8BL | "Post-embryonic cell of pedigree TL.appaaapa, male sensory rays, neuron, darkly staining tip, open to outside." [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008404:R8B |
part_of
WBbt:0006965:ray 8 left |
WormAtlas |
| R8BR | "Male sensory rays, neuron, darkly staining tip, open to outside" [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008404:R8B |
part_of
WBbt:0006966:ray 8 right |
WormAtlas |
| R9AL | "Male sensory rays, neuron, striated rootlet" [ISBN:0-87969-307-X] |
WBbt:0006858:R9A WBbt:0007030:post-embryonic cell |
part_of
WBbt:0006967:ray 9 left |
WormAtlas |
| R9AR | "Male sensory rays, neuron, striated rootlet" [ISBN:0-87969-307-X] |
WBbt:0006858:R9A WBbt:0007030:post-embryonic cell |
part_of
WBbt:0006968:ray 9 right |
WormAtlas |
| R9BL | "Post-embryonic cell of pedigree TL.appapapa, male sensory rays, neuron, darkly staining tip, open to outside." [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008405:R9B |
part_of
WBbt:0006967:ray 9 left |
WormAtlas |
| R9BR | "Male sensory rays, neuron, darkly staining tip, open to outside" [ISBN:0-87969-307-X] |
WBbt:0007030:post-embryonic cell WBbt:0008405:R9B |
part_of
WBbt:0006968:ray 9 right |
WormAtlas |
| RIH | "Neuron class of one ring interneuron." [ISBN:0-87969-307-X] |
WBbt:0005113:interneuron head neuron :head neuron WBbt:0006837:serotonergic neuron nerve ring neuron :nerve ring neuron WBbt:0007028:embryonic cell |
part_of
WBbt:0005266:ventral ganglion (ant) |
WormAtlas |
| RIS | "Neuron class of one ring interneuron." [ISBN:0-87969-307-X] |
WBbt:0005113:interneuron GABAergic neuron :GABAergic neuron head neuron :head neuron nerve ring neuron :nerve ring neuron WBbt:0007028:embryonic cell |
part_of
WBbt:0005264:ventral ganglion (post) |
WormAtlas |
| SAB | "Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head." [WB:Paper00000938] |
WBbt:0005113:interneuron WBbt:0006840:cholinergic neuron nerve ring neuron :nerve ring neuron |
||
| U cell | "Rectal cell, postembryonic blast cell in male" [ISBN:0-87969-307-X] |
rectal epithelium
:rectal epithelium WBbt:0006783:blast cell WBbt:0008182:rectal epithelial cell |
WormAtlas | |
| VA neuron | "Neuron class of twelve motoneurons, distributed along the ventral cord, which innervate ventral body muscles." [WB:Paper00000938] |
WBbt:0005409:motor neuron WBbt:0006840:cholinergic neuron |
||
| Y cell | "Rectal cell at hatching, becomes PDA in hermaphrodite, postembryonic blast cell in male" [ISBN:0-87969-307-X] |
rectal epithelium
:rectal epithelium WBbt:0006783:blast cell WBbt:0008182:rectal epithelial cell |
WormAtlas | |
| Z1 | "Somatic gonad precursor cell" [ISBN:0-87969-307-X] |
WBbt:0007028:embryonic cell WBbt:0007854:somatic gonad precursor |
||
| Z1.p | "cell, posterior descendent of Z1." [WB:rynl] |
WBbt:0007030:post-embryonic cell |
||
| Z4 | "Somatic gonad precursor cell" [ISBN:0-87969-307-X] |
WBbt:0007028:embryonic cell WBbt:0007854:somatic gonad precursor |
||
| Z4.a | "cell, anterior descendent of Z4." [WB:rynl] |
WBbt:0007030:post-embryonic cell |
||
| amphid neuron | "neuron of the amphid sensillum" [WB:rynl] |
WBbt:0006816:ciliated neuron |
part_of
WBbt:0005391:amphid sensillum |
WormAtlas |
| anal depressor muscle | "a single, H-shaped cell which lies just above the anus and connects the roof of the anal canal to the dorsal bodywall; its contractions act to increase the size of the anal opening by lifting the roof of the rectum and hence facilitate expulsion of intestinal contents." [ISBN:0-87969-307-X, WBPaper:00038216] |
WBbt:0008600:enteric muscle |
WormAtlas | |
| anal sphincter muscle | "a saddle-shaped muscle cell that encircles the intestinal-rectal valve" [WB:rynl, WBPaper:00038216] |
WBbt:0005781:smooth muscle WBbt:0008600:enteric muscle |
WormAtlas | |
| body region | "region of the body by which tissues, cells or cell parts are classified" [WBPaper:00038216] |
WBbt:0005766:Anatomy |
||
| body wall muscle cell | "type of 95 cells that make up muscles of the body wall." [WB:rynl] |
WBbt:0005779:striated muscle WBbt:0007810:body muscle cell |
||
| body wall musculature | "Longitudinal bands of muscle cells surrounding animal body, with one band running in each quadrant of the body, regulated contraction and relaxation of these muscles cause locomotion." [ISBN:0-87969-433-5] |
WBbt:0005737:muscular system |
WormAtlas | |
| cephalic sheath cell | "sheath cell of the cephalic sensilla." [WB:rynl] |
WBbt:0005811:neuronal sheath cell |
||
| coelomocyte | "A free-floating spherical cell lying in the pseudocoelomic cavity of larvae and adult C. elegans which can endocytose many compounds, possibly for immune surveillance. There are six coelomocytes in adult hermaphrodites, and they display prominent cytoplasmic inclusions and vacuoles." [WBPaper:00038216] |
Cell
:Cell |
part_of
WBbt:0005749:coelomic system |
WormAtlas |
| dopaminergic neuron | "Neuron that uses dopamine (DA) as a neurotransmitter." [WB:rynl] |
neuron
:neuron |
||
| dorsal nerve cord | "a bundle of nerve processes that runs along the dorsal mid-line of the animal." [WB:Paper00000938] |
part_of
WBbt:0005760:somatic nervous system |
WormAtlas | |
| dorsal-rectal ganglion neuron | "neuron whose cell body is in the dorsal-rectal ganglion. " [WB:rynl] |
tail neuron
:tail neuron |
part_of
dorso-rectal ganglion
:dorso-rectal ganglion |
|
| dorso-rectal ganglion | "the ganglion that lies above and behind the rectum in the tail, in close continuity with the anal hypodermal ridge. It contains 3 neuron cell bodies (DVA, DVB and DVC) that send their neuronal processes into the ventral nerve cord via dorso-rectal commissures that encircle the anus. The ganglion contains no local neuropil in the hermaphrodite. In the adult male tail, this ganglion gains additional neurons and some local neuropil. " [WBPaper:00038216] |
WBbt:0006977:tail ganglion |
WormAtlas | |
| epithelial cell | "cell of epithelium, the layer of cells that cover the external surface of an organism as well as forming an inner lining between the tissues and organs of that organism and the external environment. In C. elegans epithelial cells include epithelium of the alimentary tract, intestinal cells, hypodermis, interfacial cells and somatic gonad cells." [WB:rynl, WBPaper:00038216] |
Cell
:Cell |
||
| excretory canal | "Four processes (canals) of the excretory canal cell each contain a central collecting lumen which feeds to a central lumenal canal in the cell body; the central canal forms a specialized membrane to release fluids into the excretory duct. These five canals form a continuous H-shaped channel which extends almost the full length of the body, generally in contact with the lateral hypodermis and the pseudocoelom." [WBPaper:00038216] |
WBbt:0005732:extracellular component |
part_of
excretory cell
:excretory cell |
WormAtlas |
| excretory cell | "H-shaped cell associated with the excretory system, largest cell in C. elegans." [WB:rynl] |
Cell
:Cell |
part_of
WBbt:0005736:excretory system |
WormAtlas |
| excretory duct | "The extracellular sinus formed by the excretory duct and pore cells." [WBPaper:00038216] |
WBbt:0005732:extracellular component |
part_of
WBbt:0004540:excretory duct cell |
WormAtlas |
| excretory pore | "The outlet of the excretory sinus to the exterior environment through the cuticle, on the ventral side of the head, just behind the nerve ring." [WBPaper:00038216] |
WBbt:0005732:extracellular component |
part_of
WBbt:0004534:excretory socket cell |
WormAtlas |
| g1 | "pharyngeal gland cell." [WB:rynl] |
pharyngeal gland cell
:pharyngeal gland cell |
part_of
terminal bulb
:terminal bulb |
WormAtlas |
| g2 | "pharyngeal gland cell." [WB:rynl] |
pharyngeal gland cell
:pharyngeal gland cell |
part_of
terminal bulb
:terminal bulb |
WormAtlas |
| g2L | "Pharyngeal gland cells" [ISBN:0-87969-307-X] |
g2
:g2 |
||
| g2R | "Pharyngeal gland cells" [ISBN:0-87969-307-X] |
g2
:g2 |
||
| germ line | "cell line which early in development becomes differentiated from the remaining somatic cell line, and alone has the potential to undergo meiosis and form gametes." [ISBN:0140512888] |
Cell
:Cell WBbt:0005729:Tissue |
part_of
reproductive system
:reproductive system |
|
| germline precursor cell | "member of a set of two cells that generate exclusively sperm and ovum." [WB:rynl] |
germ line
:germ line |
||
| gon_herm_dtc_A | "Anterior distal tip cell, inhibit meiosis in neighbouring germ cells, lead gonad during morphogenesis, herm gonad" [ISBN:0-87969-307-X] |
WBbt:0006863:hermaphrodite distal tip cell |
part_of
WBbt:0005374:anterior gonad arm |
|
| gon_herm_dtc_P | "Posterior distal tip cell, inhibit meiosis in neighbouring germ cells, lead gonad during morphogenesis, herm gonad" [ISBN:0-87969-307-X] |
WBbt:0006863:hermaphrodite distal tip cell |
part_of
WBbt:0005466:posterior gonad arm |
|
| gon_male_dtc anterior | "Distal tip cell, inhibits meiosis in nearby germ cells, anterior" [ISBN:0-87969-307-X] |
WBbt:0006864:male distal tip cell |
||
| gon_male_dtc posterior | "Distal tip cell, inhibits meiosis in nearby germ cells, posterior." [ISBN:0-87969-307-X] |
WBbt:0006864:male distal tip cell |
||
| gonadal sheath cell | "five pairs of thin gonadal sheath cells form a single layer covering the germ line component of each arm, each pair occupying a stereotyped position along the gonad proximal-distal axis." [WBPaper:00038216] |
WBbt:0005781:smooth muscle WBbt:0005786:muscle of the reproductive system WBbt:0007815:hermaphrodite somatic gonadal cell |
WormAtlas | |
| head ganglion | "ganglion in the head." [WB:rynl] |
WBbt:0005189:ganglion |
part_of
WBbt:0005739:head |
|
| head muscle | "body wall muscle in the head, including first eight cells of each muscle quadrants which are innervated by nerve ring neurons." [WB:Paper00001594, WB:rynl] |
body wall musculature
:body wall musculature |
part_of
WBbt:0005739:head |
|
| head neuron | "neuron with its cell body situated in the head, excluding the pharynx." [WB:rynl] |
neuron
:neuron |
part_of
WBbt:0005739:head |
|
| hermaphrodite-specific | "cells or anatomical parts specific to the hermaphrodite sex" [WB:rynl] |
WBbt:0005752:Sex specific entity WBbt:0007849:hermaphrodite |
||
| hmc | "Head mesodermal cell, function unknown" [ISBN:0-87969-307-X] |
Cell
:Cell |
part_of
WBbt:0005737:muscular system |
|
| hyp4 | "Cylindrical hypodermal syncytium in head" [ISBN:0-87969-307-X] |
hypodermal cell
:hypodermal cell WBbt:0008074:syncytium |
part_of
WBbt:0005373:anterior hypodermis |
|
| hyp6 | "Cylindrical hypodermal syncytium in head" [ISBN:0-87969-307-X] |
hypodermal cell
:hypodermal cell WBbt:0008074:syncytium |
part_of
WBbt:0005373:anterior hypodermis |
|
| hyp7 syncytium | "entire syncytium of hyp7" [WB:pws] |
hypodermal cell
:hypodermal cell WBbt:0008074:syncytium |
part_of
_from WBbt:0008069:hyp7 precursor cell |
|
| hypodermal cell | "primary cell type that forms the hypodermis." [WB:rynl] |
epithelial cell
:epithelial cell |
part_of
hypodermis
:hypodermis |
|
| hypodermis | "epidermal layer" [WB:pws] |
part_of
WBbt:0005730:epithelial system |
||
| int1DL | "Intestinal cell" [ISBN:0-87969-307-X] |
intestinal cell
:intestinal cell |
||
| int1DR | "Intestinal cell" [ISBN:0-87969-307-X] |
intestinal cell
:intestinal cell |
||
| int1VL | "Intestinal cell" [ISBN:0-87969-307-X] |
intestinal cell
:intestinal cell |
||
| int1VR | "Intestinal cell" [ISBN:0-87969-307-X] |
intestinal cell
:intestinal cell |
||
| intestinal cell | "any of 20 large epithelial cells which form a tube and are mostly situated as bilaterally symmetric pairs around the tubular lumen. Each of these cell pairs forms an intestinal ring ( II-IX int rings). The most anterior intestinal ring (int ring I), however, is made of four cells. Intestinal cells contain large nuclei with large nucleoli and numerous autofluorescent granules in their cytoplasm." [WBPaper:00038216] |
Cell
:Cell |
part_of
intestine
:intestine |
WormAtlas |
| intestinal muscle | "intestinal muscle cell, attach to intestine and body wall anterior to anus" [WB:Paper00000653] |
WBbt:0007810:body muscle cell WBbt:0008600:enteric muscle |
part_of
intestine
:intestine |
WormAtlas |
| intestine | "A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages." [WBPaper:00038216] |
WBbt:0003760:organ |
part_of
WBbt:0005743:digestive tract part_of WBbt:0005748:alimentary system |
WormAtlas |
| lateral nerve cord | "nerve cord positioned at the lateral flanks of the animal, consists of processes of the neuron classes BDU, CAN, PVD and ALA." [WB:rynl] |
part_of
WBbt:0005760:somatic nervous system |
||
| lumbar ganglion | "The left and right lumbar ganglia lie behind the pre-anal ganglion in the tail, in lateral positions. Each contains 12 neuron cell bodies that send most of their neuronal processes into the ventral nerve cord via lumbar commissures and the pre-anal ganglion. There is no local neuropil in these ganglia in the hermaphrodite, instead they form most synapses in the pre-anal ganglion. Most lumbar neurons have sensory functions. In the adult male tail, these two ganglia gain many additional neurons and have some local neuropil. The lumbar neurons lie in close association with the lateral hypodermis, and most are posterior to the anus." [WBPaper:00038216] |
WBbt:0006977:tail ganglion |
WormAtlas | |
| lumbar neuron | "neuron in lumbar ganglion." [WB:wjc] |
tail neuron
:tail neuron |
part_of
lumbar ganglion
:lumbar ganglion |
|
| male-specific | "cells or anatomical parts specific to the male sex" [WB:rynl] |
WBbt:0005752:Sex specific entity WBbt:0007850:male |
||
| mc1 | "marginal cell, type 1." [WB:rynl] |
WBbt:0003673:marginal cell |
part_of
metacorpus
:metacorpus |
|
| mc3 | "marginal cell, type 3." [WB:rynl] |
WBbt:0003673:marginal cell WBbt:0008074:syncytium |
part_of
terminal bulb
:terminal bulb |
|
| metacorpus | "posterior segment of pharyngeal corpus." [WB:rynl] |
part_of
WBbt:0003733:corpus |
WormAtlas | |
| mu_int_L | "left intestinal muscle cell, attach to intestine and body wall anterior to anus" [ISBN:0-87969-307-X] |
intestinal muscle
:intestinal muscle |
||
| mu_int_R | "right intestinal muscle cell, attach to intestine and body wall anterior to anus" [ISBN:0-87969-307-X] |
intestinal muscle
:intestinal muscle |
||
| muscle cell | "contractile cell that makes up muscle tissue." [WB:rynl] |
Cell
:Cell |
part_of
WBbt:0005737:muscular system |
WormAtlas |
| nerve ring | "the most extensive region of neuropil in the animal, consists of a large toroidal bundle of processes." [WB:Paper00000938] |
part_of
WBbt:0005739:head part_of WBbt:0005760:somatic nervous system |
WormAtlas | |
| nerve ring neuron | "neuron that has neural processes in the nerve ring." [WB:rynl] |
somatic neuron
:somatic neuron |
WormAtlas | |
| nervous system | "Complement of nervous tissue (neurones, nerves, receptors and support cells) serving to detect, relay and coordinate information about an animal's internal and external environments and to initiate and integrate its effector responses and activities." [ISBN:0-14-051288-8, WB:rynl] |
WBbt:0005746:Organ system |
WormAtlas | |
| neuron | "Major cell type of nervous tissue, specialized for transmission of information in the form of patterns of impulses." [ISBN:0140512888] |
Cell
:Cell |
part_of
nervous system
:nervous system |
WormAtlas |
| oocyte | "a female haploid germ cell." [WB:wjc] |
hermaphrodite-specific
:hermaphrodite-specific WBbt:0006796:germ cell |
WormAtlas | |
| pharyngeal gland cell | "secretory gland cell of the pharynx" [WB:rynl] |
WBbt:0003670:gland cell WBbt:0005460:pharyngeal cell |
WormAtlas | |
| pharyngeal muscle cell | "type of cells that make up muscle layers in the pharynx." [WB:rynl] |
WBbt:0005460:pharyngeal cell WBbt:0005820:alimentary muscle |
WormAtlas | |
| pharyngeal neuron | "neuron of the pharyngeal nervous system." [WB:rynl] |
neuron
:neuron WBbt:0005460:pharyngeal cell |
part_of
WBbt:0005440:pharyngeal nervous system |
WormAtlas |
| pharyngeal-intestinal valve | "A group of six equivalent cells forms a tightly constructed 'valve' that links the posterior bulb of the pharynx to the anterior four cells of the intestine. These six cells comprise a small epithelial channel with a cuticular lining in continuity with the pharyngeal cuticle and link the lumen of the pharynx to the large lumen of the anterior intestine." [WBPaper:00038216] |
part_of
WBbt:0005748:alimentary system |
WormAtlas | |
| pharynx | "the feeding organ, a neuro-muscular pump in the head of the animal, used to ingest food, bacteria suspended in liquid, filter them out, grind them up and transport posteriorly into the instestine." [WB:rynl] |
WBbt:0003760:organ |
part_of
WBbt:0005743:digestive tract part_of WBbt:0005748:alimentary system |
WormAtlas |
| phasmid neuron | "neuron of phasmid sensillum" [WB:rynl] |
WBbt:0006816:ciliated neuron |
part_of
WBbt:0005425:phasmid sensillum |
WormAtlas |
| pm3 | "third pharyngeal muscle cell layer" [WB:rynl] |
pharyngeal muscle cell
:pharyngeal muscle cell WBbt:0008074:syncytium |
part_of
procorpus
:procorpus |
WormAtlas |
| pm4 | "fourth pharyngeal muscle cell layer" [WB:rynl] |
pharyngeal muscle cell
:pharyngeal muscle cell WBbt:0008074:syncytium |
part_of
metacorpus
:metacorpus |
WormAtlas |
| pm6 | "sixth pharyngeal muscle cell layer" [WB:rynl] |
pharyngeal muscle cell
:pharyngeal muscle cell |
part_of
terminal bulb
:terminal bulb |
WormAtlas |
| pm7 | "seventh pharyngeal muscle cell layer" [WB:rynl] |
pharyngeal muscle cell
:pharyngeal muscle cell |
part_of
terminal bulb
:terminal bulb |
WormAtlas |
| pm8 | "eighth pharyngeal muscle cell layer (single cell)" [ISBN:0-87969-307-X] |
pharyngeal muscle cell
:pharyngeal muscle cell |
part_of
terminal bulb
:terminal bulb |
WormAtlas |
| preanal ganglion | "ganglion anterior to the anus." [WB:rynl] |
WBbt:0005332:body ganglion |
WormAtlas | |
| preanal ganglion neuron | "neuron with cell body in the preanal ganglion." [WB:rynl, WBPaper:00000938] |
neuron
:neuron |
part_of
preanal ganglion
:preanal ganglion |
|
| procorpus | "anterior section of pharyngeal corpus." [WB:rynl] |
part_of
WBbt:0003733:corpus |
WormAtlas | |
| rectal epithelium | "epithelium connecting intestine and anus." [WB:rynl] |
part_of
WBbt:0005773:rectum |
WormAtlas | |
| rectal gland cell |
WBbt:0003670:gland cell |
part_of
WBbt:0005773:rectum |
WormAtlas | |
| rectal valve cell | "cell that forms intestinal-rectal valve." [WB:rynl] |
epithelial cell
:epithelial cell |
part_of
WBbt:0005773:rectum |
WormAtlas |
| reproductive system |
WBbt:0005746:Organ system |
|||
| retrovesicular ganglion | "ganglion that lies at the anterior limit of the ventral nerve cord, near the ventral ganglion and nerve ring in the head posterior to the excretory pore. It is open and continuous with the region containing the motoneurons of the ventral cord. In the early L1 this ganglion holds 12 neuron cell bodies plus one neuroblast (Sulston and Horvitz, 1977; White et al., 1986). In the adult animal, the ganglion holds 20 neuron cell bodies.\nReversal \n\n" [WBPaper:00038216] |
WBbt:0005332:body ganglion |
WormAtlas | |
| seam cell | "a group of hypodermal cells that lie along the apical midline of the hypodermis, at the extreme left and right sides between nose and tail" [WB:rynl, WBPaper:00038216] |
hypodermal cell
:hypodermal cell |
WormAtlas | |
| socket cell | "An interfacial epithelial cell which forms a distal cap on a sheath cell to bind the sheath of a sensillum to the neighboring hypodermis, via adherens junctions. There is often a narrow opening through the socket from the exterior into the sheath channel, allowing ciliated dendrites to be exposed to the external environment. The socket cell functions similarly to a glial cell." [WBPaper:00038216] |
WBbt:0005754:interfacial epithelial cell WBbt:0005762:accessory cell |
WormAtlas | |
| somatic neuron | "neuron of the somatic nervous system." [WB:rynl] |
neuron
:neuron |
part_of
WBbt:0005760:somatic nervous system |
|
| spermatheca | "an accordion-like tube that contains sperm and is the site of oocyte fertilization." [WBPaper:00038216] |
hermaphrodite-specific
:hermaphrodite-specific |
part_of
WBbt:0005178:hermaphrodite gonad |
WormAtlas |
| spermathecal-uterine junction | "A valve tissue that connects the spermatheca and the uterus of a hermaphrodite gonad." [WB:rynl] |
WBbt:0005729:Tissue |
part_of
WBbt:0005178:hermaphrodite gonad |
WormAtlas |
| tail | "posterior region, from rectum to the end" [WB:rynl] |
body region
:body region |
WormAtlas | |
| tail neuron | "neuron with its cell body situated in the tail, posterior to rectum." [WB:rynl] |
neuron
:neuron |
part_of
WBbt:0006977:tail ganglion |
|
| terminal bulb | "the last, posterior bulb of the pharynx." [WB:rynl] |
WBbt:0005789:pharyngeal segment |
WormAtlas | |
| uterus | "The organ in which the eggs are developed and protected until laid." [ISBN:0198611862, WB:rynl] |
part_of
WBbt:0005178:hermaphrodite gonad part_of WBbt:0008587:egg-laying apparatus |
WormAtlas | |
| uv1 | "uterine-vulval cell proximal to the vulva." [WB:Paper00002608] |
WBbt:0006790:uterine-vulval cell |
WormAtlas | |
| uv2 | "uterine-vulval cell, medial position of three ut cells." [WB:Paper00002608] |
WBbt:0006790:uterine-vulval cell |
WormAtlas | |
| ventral cord neuron | "neuron with cell body associated with the ventral nerve cord." [WB:Paper00000938] |
somatic neuron
:somatic neuron |
WormAtlas | |
| ventral nerve cord | "a large process bundle that runs along the vental mid-line extending from the ventral region of the nerve ring." [WB:Paper00000938] |
part_of
WBbt:0005760:somatic nervous system |
WormAtlas | |
| virL | "Intestino-rectal valve" [ISBN:0-87969-307-X] |
rectal valve cell
:rectal valve cell |
WormAtlas | |
| virR | "Intestino-rectal valve" [ISBN:0-87969-307-X] |
rectal valve cell
:rectal valve cell |
WormAtlas | |
| vm1 | "Vulval muscle 1" [ISBN:0-87969-307-X] |
WBbt:0006917:vulval muscle, type 1 |
||
| vm1 | "Vulval muscle 1" [ISBN:0-87969-307-X] |
WBbt:0006917:vulval muscle, type 1 |
||
| vm1 | "Vulval muscle 1" [ISBN:0-87969-307-X] |
WBbt:0006917:vulval muscle, type 1 |
||
| vm1 | "Vulval muscle 1" [ISBN:0-87969-307-X] |
WBbt:0006917:vulval muscle, type 1 |
WormAtlas | |
| vulE | "adult vulval toroid cell, E, formed by fusion of precursors of lineage names P6.paal, P6.paar, P6.pppl and P6.pppr." [WB:wjc] |
WBbt:0007831:vulval cell WBbt:0008074:syncytium |
WormAtlas | |
| vulF | "adult vulval toroid cell, F, formed by fusion of precursors of lineage names P6.papl, P6.papr, P6.ppal and P6.ppar." [WB:wjc] |
WBbt:0007831:vulval cell WBbt:0008074:syncytium |
WormAtlas | |
| vulva | "female genital." [WB:rynl] |
hermaphrodite-specific
:hermaphrodite-specific WBbt:0008422:sex organ |
part_of
WBbt:0005740:midbody part_of WBbt:0008587:egg-laying apparatus |
WormAtlas |
| vulval muscle | "muscle associated with hermaphrodite vulva." [WB:rynl] |
hermaphrodite-specific
:hermaphrodite-specific WBbt:0005780:non-striated muscle WBbt:0007810:body muscle cell |
part_of
WBbt:0008587:egg-laying apparatus |
WormAtlas |
| vulval precursor cell | "cell that has the potential to form structural part of a vulva." [WB:rynl] |
WBbt:0006783:blast cell |