JCEG ID JCEG207
Name H41C03.1      WormBase    NCBI Gene
Human Ortholog

GGDB:GCNT2 

OMIM:

Family Name b6GnT
Locus Tag H41C03.1
RNAi phenotype
phenotype WT
Microscope observation (Image)
COPAS (Image)
hsp-4::GFP (Image)
Sequence Features kr:Detected
tm:Detected
dxd:NHD/
gg_motif:M1, M2, M4
Sequence CDS
Protein
References

Kamath RS, Fraser AG, Dong Y, Poulin G, Durbin R, Gotta M, Kanapin A, Le Bot N, Moreno S, Sohrmann M, Welchman DP, Zipperlen P, Ahringer J Nature (2003) 421 (6920) :231-7 [PMID : 12529635] Systematic functional analysis of the Caenorhabditis elegans genome using RNAi.

Simmer F, Moorman C, van der Linden AM, Kuijk E, van den Berghe PV, Kamath RS, Fraser AG, Ahringer J, Plasterk RH PLoS Biol. (2003) 1 (1) :E12 [PMID : 14551910] Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals novel gene functions.

Winter JF, Hopfner S, Korn K, Farnung BO, Bradshaw CR, Marsico G, Volkmer M, Habermann B, Zerial M Nat. Cell Biol. (2012) 14 (7) :666-76 [PMID : 22634595] Caenorhabditis elegans screen reveals role of PAR-5 in RAB-11-recycling endosome positioning and apicobasal cell polarity.

WormBase (WS254)

Functional Descriptions H41C03.1

none available
Deletion Mutants tm1211
In Situ
Expression Expression
db_name wbbt name def reliability expr_pattern paper WormAtlas
WB WBbt:0005733

hypodermis "epidermal layer" [WB:pws] Enriched WBPaper00037950 : hypodermis_embryo_SelectivelyEnriched, hypodermis_embryo_enriched
WBPaper00037950
WB WBbt:0006831

PVD "Neuron class of two interneurons with cell bodies situated laterally in the posterior body." [WB:Paper00000938] Enriched WBPaper00036375 : enriched_in_PVD_OLL
WBPaper00036375
WB WBbt:0006847

OLL "Neuron class of two neurons with ciliated endings in the lateral outer labial sensilla." [WB:Paper00000938] Enriched WBPaper00036375 : enriched_in_PVD_OLL
WBPaper00036375

WBGene00019268
Phenotype
Homology_paralog

Observed Observed and NOT Observed
Phenotype Definition RNAi / Allele
avoids bacterial lawn

"Lawn avoidance refers to behavior in which animals initially enter the bacterial lawn but later exit and remain near the edge of the bacteria. Lawn avoidance is often a response to bacterial food, that is pathogenic or low quality to the animal." [WB:WBPaper00029071, WB:WBPerson2021]
RNAi: WBRNAi00095663   WBPaper00040984   Observed
clear

"Animals appear unusually transparent when compared to control." [WB:cab, WB:WBPaper00004402, WB:WBPaper00005654]
RNAi: WBRNAi00008936   WBPaper00005654   Observed
egg laying variant

" Animals exhibit variations in the stage of eggs laid, egg laying cycle, number of eggs or egg laying in response to stimuli compared to control." [pmid:11813735, pmid:9697864, WB:cab]
RNAi: WBRNAi00008936   WBPaper00005654   Observed
pale

"Animals show deficiencies in chroma resulting in increased translucency." [WB:WBPerson2021, WB:WBPerson557]
RNAi: WBRNAi00025823   WBPaper00006395   Observed
pharyngeal pumping reduced

"Pharyngeal pumping motion occurs at a slower rate than control animals." [WB:WBPaper00001709]
RNAi: WBRNAi00096874   WBPaper00040984   Observed
RAB-11 recycling endosome morphology variant

"Any variation in the form or composition of membrane bound organelles, known as recycling endosomes, positive for the RAB protein RAB-11, that traffic material from early endosomes back to the plasma membrane of the cell, thereby recycling recently endocytosed material to be reused at the plasma membrane." [WB:WBPaper00041129, WB:WBPerson2987]
RNAi: WBRNAi00090921   WBPaper00041129   Observed
sick

"Animals exhibit some combination of abnormal features relating to size, movement, body integrity, pigmentation, viability, fertility etc." [WB:WBPaper00000179, WB:WBPaper00000565, WB:WBPerson712]
RNAi: WBRNAi00008936   WBPaper00005654   Observed
slow growth

"Any variation that causes a reduction in growth rate compared to control." [WB:cab, WB:WBPaper00004402, WB:WBPaper00004403, WB:WBPaper00004651, WB:WBPaper00004769, WB:WBPaper00005654, WB:WBPaper00006395, WB:WBPaper00024497, WB:WBPerson557]
RNAi: WBRNAi00025823   WBPaper00006395   Observed
RNAi: WBRNAi00095663   WBPaper00040984   Observed
transgene expression increased

"Any increase in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals." [WB:WBPerson557]
RNAi: WBRNAi00095865   WBPaper00040984   Observed
RNAi: WBRNAi00095942   WBPaper00040984   Observed
RNAi: WBRNAi00096094   WBPaper00040984   Observed
RNAi: WBRNAi00096248   WBPaper00040984   Observed
transgene subcellular localization variant

"Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals." [WB:WBPerson557]
RNAi: WBRNAi00090921   WBPaper00041129   Observed


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