JCEG ID JCEG191
Name gly-16      WormBase    NCBI Gene
Human Ortholog

GGDB:GCNT1 GCNT2 

OMIM:

OrthoList :   GCNT7   GCNT4   GCNT2   GCNT3   GCNT1   GCNT6  (Ensembl Compara)

GWAS Catalog
STREAMRAFp-valueORBETACIStudy
DOWNSTREAM 0.71 0.000007 1.56 [1.28-1.89] 21546767
GGDB Score E-val
GCNT1 144 3e-36
GCNT2 140 3e-35
GCNT2 127 3e-31
GCNT3 123 5e-30
GCNT2 123 5e-30
GCNT4 104 3e-24
Option tblastn : Query Worm Protein, Subject GGDB mRNA, E-val < 0.00001
Family Name b6GnT
Locus Tag T15D6.2
RNAi phenotype
phenotype WT
Microscope observation (Image)
COPAS (Image)

Normal

hsp-4::GFP (Image)
Sequence Features kr:Detected
tm:Detected
dxd:GVD/DEG
gg_motif:M1, M2, M3, M4, M5
Sequence CDS
Protein
References

Warren CE, Krizus A, Dennis JW Glycobiology (2001) 11 (11) :979-88 [PMID : 11744632] Complementary expression patterns of six nonessential Caenorhabditis elegans core 2/I N-acetylglucosaminyltransferase homologues.

Berninsone PM WormBook (2006) :1-22 [PMID : 18050430] Carbohydrates and glycosylation.

Shaye DD, Greenwald I PLoS ONE (2011) 6 (5) :e20085 [PMID : 21647448] OrthoList: a compendium of C. elegans genes with human orthologs.

WormBase (WS254)

Functional Descriptions gly-16

gly-16 encodes a protein similar to 2/I N-acetylglucosaminyltransferase; gly-16 is expressed in the seam cells during embryonic stages.
Deletion Mutants qa701
In Situ
Expression Expression
db_name wbbt name def reliability expr_pattern paper WormAtlas
WB WBbt:0003675

muscle cell "contractile cell that makes up muscle tissue." [WB:rynl] Enriched WBPaper00031003 : 24hr_muscle_enriched, total_muscle_enriched
WBPaper00031003 WormAtlas
WB WBbt:0005753

seam cell "a group of hypodermal cells that lie along the apical midline of the hypodermis, at the extreme left and right sides between nose and tail" [WB:rynl, WBPaper:00038216] Certain WB:Expr1784 WBPaper00005030 WormAtlas

WBGene00001641
Phenotype
Homology_paralog

Observed Observed and NOT Observed
Phenotype Definition RNAi / Allele


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