JCEG ID JCEG188
Name gly-15      WormBase    NCBI Gene
Human Ortholog

GGDB:GCNT1 

OMIM:

OrthoList :   GCNT7   GCNT4   GCNT2   GCNT3   GCNT1   GCNT6  (Ensembl Compara)

GWAS Catalog
STREAMRAFp-valueORBETACIStudy
DOWNSTREAM 0.71 0.000007 1.56 [1.28-1.89] 21546767
GGDB Score E-val
GCNT1 145 2e-36
GCNT3 132 1e-32
GCNT2 122 9e-30
GCNT2 116 6e-28
GCNT4 109 7e-26
GCNT2 107 3e-25
Option tblastn : Query Worm Protein, Subject GGDB mRNA, E-val < 0.00001
Family Name b6GnT
Locus Tag C54C8.11
RNAi phenotype
phenotype WT
Microscope observation (Image)
COPAS (Image)

Normal

hsp-4::GFP (Image)
Sequence Features kr:Detected
tm:Detected
dxd:GVD/DES
gg_motif:M1, M2, M3, M4, M5
Sequence CDS
Protein
References

Warren CE, Krizus A, Dennis JW Glycobiology (2001) 11 (11) :979-88 [PMID : 11744632] Complementary expression patterns of six nonessential Caenorhabditis elegans core 2/I N-acetylglucosaminyltransferase homologues.

Berninsone PM WormBook (2006) :1-22 [PMID : 18050430] Carbohydrates and glycosylation.

Shaye DD, Greenwald I PLoS ONE (2011) 6 (5) :e20085 [PMID : 21647448] OrthoList: a compendium of C. elegans genes with human orthologs.

WormBase (WS254)

Functional Descriptions gly-15

gly-15 encodes a protein similar to 2/I N-acetylglucosaminyltransferase; gly-15 expressed only in cellular processes that are probably part of the secretory network of the G2 gland cells.
Deletion Mutants ok2682
In Situ
Expression Expression
db_name wbbt name def reliability expr_pattern paper WormAtlas
WB WBbt:0004524

g2R "Pharyngeal gland cells" [ISBN:0-87969-307-X] Uncertain WB:Expr1783 WBPaper00005030
WB WBbt:0004524

g2R "Pharyngeal gland cells" [ISBN:0-87969-307-X] Certain WB:Expr11794 WBPaper00041256
WB WBbt:0004526

g2L "Pharyngeal gland cells" [ISBN:0-87969-307-X] Uncertain WB:Expr1783 WBPaper00005030
WB WBbt:0004526

g2L "Pharyngeal gland cells" [ISBN:0-87969-307-X] Certain WB:Expr11794 WBPaper00041256

WBGene00001640
Phenotype
Homology_paralog

Observed Observed and NOT Observed
Phenotype Definition RNAi / Allele


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