| JCEG ID |
JCEG026 |
| Name |
T28F2.1
WormBase
NCBI Gene
|
| Human Ortholog |
GGDB:FUT1
OMIM:
GWAS Catalog
| STREAM | RAF | p-value | OR | BETA | CI | Study |
| MAPPED |
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0.0000000003
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24941225
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Liang Y 2014-06-18 PLoS One
Genetic variations affecting serum carcinoembryonic antigen levels and status of regional lymph nodes in patients with sporadic colorectal cancer from Southern China.
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| Family Name |
Fucosyltransferases |
| Locus Tag |
T28F2.1
|
| RNAi phenotype |
|
phenotype
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WT
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Microscope observation (Image)
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COPAS (Image)
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Normal
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hsp-4::GFP (Image)
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| Sequence Features |
tm:Detected
kr:Detected
gg_motif:M1,M3
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| Sequence |
CDS
atgcggtatgcaaaacgaatatttaactttattttgaaaaataacaagtt
ttatatagtaattatagttgtattacttttaattgtaatttttcaatgga
tggttccaggttattatgactataatcaaatttcgacgttggtttattgt
gataagaatcccagcgatcaacatagatatttattatttccaatggttac
aattgttttcgatggaggtttaggaaaccaactcttcgaagtattttcac
tgcttggacttgctctgaaactcaatcgaactgcaattttcaatagtgag
gactggattcttcactcaaaattaaatcttctccgagaacaagtacctca
agttgccgaaagagttatttctattccaattgagatccctgaatccagtc
gatttatatactccccagcatgttgtcattttcaattttcgccccttctt
tcctgtgaacaaagcaaatatcttgttattgatggacattattttcagag
tcacaagtacttctcttctatagagacttcgataagaaaatggttgaatc
ccccacaagaagaagagaagctattgaaaaagatgatcaggagaaaagat
gaattccgattcaaaatctgcgtccacatccgccgcggggattttctgac
agactcccaacacgctggaactgcttcaaactttacgattcgtgctgtag
accacttgtacactcagcatcccggattggtatatctgttcagtaatgac
ccaggttgggttagagagaaaatagctgcacatcttgactatcagagtga
tgttaaagtaatggaaacgtcagaagcaatcaaggatttatattttgcac
agattcattgtgatgctgtgttaattaccgctccttcctcgacatttggc
tggtggctcggatatttgtcaaaaaatcaatcaagtgtgtattacaggga
tattcaggagacagaggatatggtcaaacaccaaatggtggaagaggatt
tcttcccgtccacgtggaagaaattggggatgtcacaaaacgggctgata
atttcaaaataa
|
Protein
MRYAKRIFNFILKNNKFYIVIIVVLLLIVIFQWMVPGYYDYNQISTLVYCDKNPSDQHRY
LLFPMVTIVFDGGLGNQLFEVFSLLGLALKLNRTAIFNSEDWILHSKLNLLREQVPQVAE
RVISIPIEIPESSRFIYSPACCHFQFSPLLSCEQSKYLVIDGHYFQSHKYFSSIETSIRK
WLNPPQEEEKLLKKMIRRKDEFRFKICVHIRRGDFLTDSQHAGTASNFTIRAVDHLYTQH
PGLVYLFSNDPGWVREKIAAHLDYQSDVKVMETSEAIKDLYFAQIHCDAVLITAPSSTFG
WWLGYLSKNQSSVYYRDIQETEDMVKHQMVEEDFFPSTWKKLGMSQNGLIISK
|
| References |
|
| Functional Descriptions |
T28F2.1
none available
|
| Deletion Mutants |
|
| In Situ |
|
| Expression |
Expression
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Phenotype
WBGene00020900
Homology_paralog
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| Phenotype |
Definition |
RNAi / Allele |
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embryonic lethal
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"Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die." [WB:cab, WB:WBPaper00000179, WB:WBPaper00004403, WB:WBPaper00004540, WB:WBPaper00004651, WB:WBPaper00004769, WB:WBPaper00005654, WB:WBPaper00024497, WB:WBPaper00024925, WB:WBPaper00025054]
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larval arrest
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"The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage." [WB:WBPaper00002958, WB:WBPerson2021]
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larval lethal
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"The animal dies at any time between hatching and onset to adulthood." [GO:0002119, WB:WBPerson712]
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maternal sterile
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" Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility)." [WB:cab, WB:cgc5599, WB:cgc7141, WB:WBPerson557]
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organism morphology variant
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"Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals." [WB:cab, WB:WBPaper00004402, WB:WBPaper00004403, WB:WBPaper00004651, WB:WBPaper00005654, WB:WBPaper00006395]
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postembryonic development variant
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"Any variation in the progression of an animal over time, from hatching to adulthood, compared to control." [WB:WBPerson2021]
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slow growth
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"Any variation that causes a reduction in growth rate compared to control." [WB:cab, WB:WBPaper00004402, WB:WBPaper00004403, WB:WBPaper00004651, WB:WBPaper00004769, WB:WBPaper00005654, WB:WBPaper00006395, WB:WBPaper00024497, WB:WBPerson557]
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sterile progeny
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"Any variation that compromises the reproductive ability of the progeny of an animal." [WB:WBPerson2021, WB:WBPerson557]
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Variant
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"Animals exhibit variations compared to a given control." [WB:WBPerson557]
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