| JCEG ID |
JCEG010 |
| Name |
C14A4.3
WormBase
NCBI Gene
|
| Human Ortholog |
GGDB:ALG9
OMIM:
606941
608776
OrthoList :
ALG9
(Ensembl Compara)
| GGDB |
Score |
E-val |
|
ALG9
|
367 |
e-103 |
Option tblastn : Query Worm Protein, Subject GGDB mRNA, E-val < 0.00001
|
| Family Name |
Asparagine-linked glycosylation (ALG) genes |
| Locus Tag |
C14A4.3
|
| RNAi phenotype |
|
phenotype
|
WT
|
|
Microscope observation (Image)
|
|
|
COPAS (Image)
|
Normal
|
|
hsp-4::GFP (Image)
|
Normal
|
|
| Sequence Features |
kr:N.D.
tm:Detected
|
| Sequence |
CDS
atggtgacgcatagaagaaaaggaggcagtggtccgccacagaaaccacc
gccaagaatagttgatcgatctagttttgacgccgacaaaaagaagataa
aagtcgaaaaactatatcacaaagccaacaatccagacaatgactggcca
ttttccttcggttcagtcttcaaaatgttgctctcaattcgaatttccgg
tgcaatatggggtattatcaatgattgtgatgaagtctacaactattggg
agccacttcatttgtttctttacggagaaggatttcaaacatgggaatac
tctcccgtttatgccatccgatcgtatttctacatttacctccactacat
tcccgcgagtctttttgccaacttgttcggtgacactaaaattgtagttt
tcactcttattcgattgacaattggtttattttgtttgttgggagaatat
tatgcatttgatgccatttgtaagaaaatcaacattgcaactggccgatt
cttcatcttattctcaattttctcatctggaatgttcctggcaagtactg
cattcgttccatcttcattctgtatggctataactttctacatacttgga
gcatatctcaacgagaattggacagctggaatcttctgcgtcgctttctc
cactatggttggctggccgttctctgctgtcttggggcttccgattgttg
ccgatatgcttttattgaaaggattaagaattagatttattctgacatcg
ttagtgattggattatgtattggtggtgtgcaggttattactgatagtca
ttattttggaaagactgttttggccccattaaacatcttcctctacaacg
ttgtcagtggtcctggtccatcactttacggagaagaaccgctctctttc
tacatcaaaaatctcttcaacaactggaatatcgtcatatttgctgctcc
atttggctttcctctgtctcttgcctatttcacaaaagtctggatgtctc
aggatagaaacgtggcactctatcaaagatttgcaccaatcatcctattg
gctgtcaccactgccgcatggcttttgatttttggaagtcaagctcataa
agaagaacgtttcctattcccaatttatccattcattgctttcttcgctg
ctcttgcattggatgccacgaatcgactgtgtctcaagaaattaggaatg
gataatattctcagcattctcttcattttgtgctttgcaattctctcggc
atcaaggacgtactcaattcataacaattatggatctcacgttgagattt
atcgatctctgaacgcagagctgacgaatcggacgaatttcaaaaatttc
catgatccaattcgtgtatgcgttggaaaagaatggcaccgcttcccttc
atcgttcttcattccacaaacagtttctgatgggaaaaaagtggaaatgc
gatttattcaaagtgaattccgcggacttttacctaaaccattcttaaaa
tcggacaagttggtggaagttacacgtcatataccaacagaaatgaataa
tctgaatcaagaagaaatatcgagatatgtggatttagattcatgcgatt
atgtggttgatgttgatatgccacagtcggatagagaacctgatttcagg
aaaatggaagataactggaaaccagtggattcgcttccattcatcgatgt
ctccaaatcaacaggattccatgggcttcttcgtgcattttatgttccat
tcctttctgccaaacataatgtcatgacgacatgcactttatatcgaaaa
tcaaatttgtaa
|
Protein
MVTHRRKGGSGPPQKPPPRIVDRSSFDADKKKIKVEKLYHKANNPDNDWPFSFGSVFKML
LSIRISGAIWGIINDCDEVYNYWEPLHLFLYGEGFQTWEYSPVYAIRSYFYIYLHYIPAS
LFANLFGDTKIVVFTLIRLTIGLFCLLGEYYAFDAICKKINIATGRFFILFSIFSSGMFL
ASTAFVPSSFCMAITFYILGAYLNENWTAGIFCVAFSTMVGWPFSAVLGLPIVADMLLLK
GLRIRFILTSLVIGLCIGGVQVITDSHYFGKTVLAPLNIFLYNVVSGPGPSLYGEEPLSF
YIKNLFNNWNIVIFAAPFGFPLSLAYFTKVWMSQDRNVALYQRFAPIILLAVTTAAWLLI
FGSQAHKEERFLFPIYPFIAFFAALALDATNRLCLKKLGMDNILSILFILCFAILSASRT
YSIHNNYGSHVEIYRSLNAELTNRTNFKNFHDPIRVCVGKEWHRFPSSFFIPQTVSDGKK
VEMRFIQSEFRGLLPKPFLKSDKLVEVTRHIPTEMNNLNQEEISRYVDLDSCDYVVDVDM
PQSDREPDFRKMEDNWKPVDSLPFIDVSKSTGFHGLLRAFYVPFLSAKHNVMTTCTLYRK
SNL
|
| References |
|
| Functional Descriptions |
C14A4.3
none available
|
| Deletion Mutants |
|
| In Situ |
clone=220e10
clone=549e12
|
| Expression |
Expression
|
WBGene00007556
Phenotype
Homology_paralog
|
|
|
| Phenotype |
Definition |
RNAi / Allele |
|
embryonic lethal
|
"Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die." [WB:cab, WB:WBPaper00000179, WB:WBPaper00004403, WB:WBPaper00004540, WB:WBPaper00004651, WB:WBPaper00004769, WB:WBPaper00005654, WB:WBPaper00024497, WB:WBPaper00024925, WB:WBPaper00025054]
|
|
|
larval arrest
|
"The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage." [WB:WBPaper00002958, WB:WBPerson2021]
|
|
|
larval lethal
|
"The animal dies at any time between hatching and onset to adulthood." [GO:0002119, WB:WBPerson712]
|
|
|
lethal
|
"Animals die prematurely at any stage of the life cycle." [WB:WBPaper00001109, WB:WBPerson2021]
|
|
|
maternal sterile
|
" Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility)." [WB:cab, WB:cgc5599, WB:cgc7141, WB:WBPerson557]
|
|
|
organism morphology variant
|
"Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals." [WB:cab, WB:WBPaper00004402, WB:WBPaper00004403, WB:WBPaper00004651, WB:WBPaper00005654, WB:WBPaper00006395]
|
|
|
postembryonic development variant
|
"Any variation in the progression of an animal over time, from hatching to adulthood, compared to control." [WB:WBPerson2021]
|
|
|
slow growth
|
"Any variation that causes a reduction in growth rate compared to control." [WB:cab, WB:WBPaper00004402, WB:WBPaper00004403, WB:WBPaper00004651, WB:WBPaper00004769, WB:WBPaper00005654, WB:WBPaper00006395, WB:WBPaper00024497, WB:WBPerson557]
|
|
|
sterile progeny
|
"Any variation that compromises the reproductive ability of the progeny of an animal." [WB:WBPerson2021, WB:WBPerson557]
|
|
|
Variant
|
"Animals exhibit variations compared to a given control." [WB:WBPerson557]
|
|