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Enzyme assay of sulfotransferases for chondroitin/dermatan
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Enzyme assay of sulfotransferases for chondroitin/dermatan

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Introduction Protocol References Credit lines
Category
Glycosyltransferases & related proteins
Protocol Name

Enzyme assay of sulfotransferases for chondroitin/dermatan

Authors
Habuchi, Osami
Advanced Medical Research Center, Aichi Medical University
KeyWords
Reagents

[35S]PAPS (10,000 cpm/pmol)

Chondroitin from squid skin

Desulfated dermatan

pFLAG-CMV-2 plasmid (Sigma-Aldrich, St. Louis, MO)

pcDNA3.1 (Invitrogen/Life Technologies, Carlsbad, CA)

COS-7 cells

FLAG M2 antibody-conjugated agarose (Sigma-Aldrich)

Clearsol (Nacalai Tesque, Inc., Kyoto, Japan)

Instruments

Desalting column (1 × 10 cm) filled with Sephadex G-25 superfine (Invitrogen/Life Technologies)

HPLC system

Partisil-10 SAX column (4.6 mm × 25 cm) (Whatman International Ltd., Kent, UK)

Liquid scintillation counter

Methods
1.

Enzyme assay of sulfotransferases for chondroitin/dermatan

1) 

 Prepare the recombinant enzymes.

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2) 

 Prepare the acceptor substrate.

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3) 

 Prepare the donor substrate, [35S]PAPS.

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4) 

 Prepare the reaction mixture (50 μL). For C4ST and C6ST, the reaction mixtures contain 50 mM imidazole-HCl buffer (pH 6.8), 0.0025% protamine chloride, 2 mM dithiothreitol, 0.5 μmol/mL (as galactosamine) chondroitin, 1 μM [35S]PAPS (about 5.0 × 105 cpm/50 μL), and the recombinant enzyme. For D4ST, the reaction mixtures contain 50 mM imidazole-HCl buffer (pH 6.8), 2 mM dithiothreitol, 5.0 × 105 cpm [35S]PAPS , 2 μM PAPS, 0.05% protamine chloride, 50 μg desulfated dermatan sulfate, and the recombinant enzyme.

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5) 

 Incubate at 37˚C for 20 min (C4ST and C6ST) or 2 h (D4ST).

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6) 

 Terminate the reaction by immersing the reaction tubes in a boiling water bath for 1 min.

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7) 

 Add 50 nmol CS-A as carrier and three volumes of ethanol containing 1% (w/v) potassium acetate. The mixtures are stirred well and placed on ice for 30 min.

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8) 

 Collect the precipitate with centrifugation at 10,000 rpm for 10 min.

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9) 

 Dissolve the precipitate in 70 μL water and inject 50 μL of the solution into a desalting column equilibrated with 0.1 M NH4HCO3 at the flow rate of 2 mL/min, and collect the void fractions.

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10) 

 Mix an aliquot of the [35S]glycosaminoglycan fraction with Clearsol and determine the radioactivity by a liquid scintillation counter.

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11) 

 Digest the [35S]glycosaminoglycan with chondroitinase ACII or chondroitinase ABC.

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12) 

 Inject the digests to Partisil-10 SAX column equilibrated with 5 mM KH2PO4 and separate ∆HexA-GalNAc(4SO4) and ∆HexA-GalNAc(6SO4).

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13) 

 Determine the radioactivity of ∆HexA-GalNAc(4SO4) for C4ST and D4ST, ∆HexA-GalNAc(6SO4) for C6ST.

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