JCGGDB TOP GlycoScience Protocol Online Database

Insert title here
Text Search

Enzyme assay for β-N-acetylhexosaminidase

Authors:  GET IN CONTACT
Introduction Protocol References Credit lines
Category
Glycosidases & related proteins
Protocol Name

Enzyme assay for β-N-acetylhexosaminidase

Authors
Hisashi Ashida
Graduate School of Biostudies, Kyoto University

Kenji Yamamoto *
Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University
*To whom correspondence should be addressed.
KeyWords
Reagents

Artificial substrates: 4-nitrophenyl N-acetyl-β-d-glucosaminide (pNP-β-GlcNAc, Sigma-Aldrich), 4-nitrophenyl N-acetyl-β-d-galactosaminide (pNP-β-GalNAc, Sigma-Aldrich)

Natural substrates: N-acetyllactosamine (GlcNAcβ1-4Gal, Sigma-Aldrich), N,N’-diacetylchitobiose (GlcNAcβ1-4GlcNAc, Sigma-Aldrich), GlcNAcβ1-2Man (Tronto Research Chemicals), lacto-N-triose II (GlcNAcβ1-3Galβ1-4Glc, prepared from lacto-N-neotetraose by β-galactosidase digestion)

Glycolipid substrates: ganglioside GM2 (GalNAcβ1-4(Neu5Acα2-3)Galβ1-4Glcβ1-1Cer), asialo-GM2 (GalNAcβ1-4Galβ1-4Glcβ1-1Cer)

4-Nitrophenol, N-acetylglucosamine and N-acetylgalactosamine as standard substance

Silica-gel 60 TLC plate (5553, Merck)

Aniline (Wako Pure Chemical Industries)

Diphenylamine (Nacalai Tesque)

Orcinol (Wako Pure Chemical Industries)

4-(Dimethylamino)benzaldehyde (Sigma)

Instruments

Incubator (37°C)

Voltex mixer (Scientific Industries)

Spectrophotometer (Beckman Coulter)

Chromatochamber

Oven (120-150°C)

Block incubator (100°C) or boiling water bath

Methods
1.

Enzyme activity assay using pNP-substrates

1) 

 Incubate 50μl substrate solution (1-2 mM) at 37°C

Comment 0
2) 

 Add 10 μl enzyme solution in a suitable buffer

Comment 0
3) 

 Incubate at 37°C for appropriate period

Comment 0
4) 

 Stop the reaction by adding 500 μl of 0.2 M sodium borate buffer (pH 10.0)

Comment 0
5) 

 Measure absorbance at 400 nm using spectrophotometer

Comment 0
2.

TLC analysis on oligosaccharide and ganglioside substrates

1) 

 Incubate substrate solution (0.5-2 mM) with enzyme at 37°C in a suitable buffer

Comment 1
2) 

 Spot 10 μl of the reaction mixture onto a silica-gel TLC plate

Comment 0
3) 

 Develop TLC plate in chromatochamber using 1-butanol:acetic acid:water=2:1:1 (for oligosaccharides) or chloroform:methanol:0.02% CaCl2=5:4:1 (for gangliosides) as solvent

Comment 0
4) 

 Dry TLC plate

Comment 0
5) 

 Spray with diphenylamine-aniline reagent (100 ml acetone, 1 ml aniline, 1 g diphenylamine, 10 ml phosphoric acid; stock 4°C) (Anderson et al., 2000) or orcinol-H2SO4 reagent (0.1 g orcinol, 6 ml H2SO4, 44 ml water)

Comment 0
6) 

 Put the sprayed TLC plate between glasses

Comment 0
7) 

 Heat at 120-150°C for 3-10 min in oven

Comment 0
3.

Determination of amount of N-acetylglucosamine and N-acetylgalactosamine released from substrate (Reissig et al., 1955)

1) 

 Incubate substrate solution (0.5-2 mM) with enzyme at 37°C in a suitable buffer

Comment 0
2) 

 Take 100 μl reaction mixture into microtube

Comment 0
3) 

 Add 20 μl borate solution (4.95 g boric acid, adjust pH 9.1 using 1 M KOH, and fill up to 100 ml by water) and incubate at 100°C for 3 min in block incubator

Comment 0
4) 

 Cool down in water (approximately 10°C)

Comment 0
5) 

 Add 600 μl DMAB solution (10 g 4-(dimethylamino)benzaldehyde, 12.5 ml conc. HCl, 87.5 ml glacial acetic acid; stock 4°C; dilute 10-times with glacial acetic acid just before use)

Comment 0
6) 

 Incubate at 37°C for 20 min

Comment 0
7) 

 Measure absorbance at 585 nm using spectrophotometer

Comment 0
Copyrights Creative Commons License   Attribution-Non-Commercial Share Alike
This work is released underCreative Commons licenses
Date of registration:2012-10-30 14:21:43
©2010 - 2012 Ritsumeikan University, AIST & JCGGDB. All Rights Reserved